Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 Z99497.1-201ENST00000421282 135 ntBASIC5.3□□□□□ -1.56
PER3P56645 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.3□□□□□ -1.56
PER3P56645 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PER3P56645 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.3□□□□□ -1.56
PER3P56645 AC007559.1-201ENST00000428736 355 ntBASIC5.3□□□□□ -1.56
PER3P56645 AL022331.1-201ENST00000429025 477 ntBASIC5.3□□□□□ -1.56
PER3P56645 RPL31P54-201ENST00000429803 370 ntBASIC5.3□□□□□ -1.56
PER3P56645 AL772161.1-201ENST00000439130 476 ntBASIC5.3□□□□□ -1.56
PER3P56645 RAB11AP1-201ENST00000442978 646 ntBASIC5.3□□□□□ -1.56
PER3P56645 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.3□□□□□ -1.56
PER3P56645 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.3□□□□□ -1.56
PER3P56645 KATNBL1P6-201ENST00000453433 915 ntBASIC5.3□□□□□ -1.56
PER3P56645 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.3□□□□□ -1.56
PER3P56645 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.3□□□□□ -1.56
PER3P56645 ATP1B1P1-201ENST00000509767 915 ntBASIC5.3□□□□□ -1.56
PER3P56645 RNU6-615P-201ENST00000516065 106 ntBASIC5.3□□□□□ -1.56
PER3P56645 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.3□□□□□ -1.56
PER3P56645 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PER3P56645 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.3□□□□□ -1.56
PER3P56645 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.3□□□□□ -1.56
PER3P56645 AC008562.1-201ENST00000521763 330 ntBASIC5.3□□□□□ -1.56
PER3P56645 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.3□□□□□ -1.56
PER3P56645 OR4A43P-201ENST00000532938 908 ntBASIC5.3□□□□□ -1.56
PER3P56645 OR7K1P-201ENST00000546439 926 ntBASIC5.3□□□□□ -1.56
PER3P56645 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.3□□□□□ -1.56
PER3P56645 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.3□□□□□ -1.56
PER3P56645 AL359219.2-201ENST00000555184 348 ntBASIC5.3□□□□□ -1.56
PER3P56645 AC122134.1-201ENST00000565664 1104 ntBASIC5.3□□□□□ -1.56
PER3P56645 AC012414.6-201ENST00000568241 401 ntBASIC5.3□□□□□ -1.56
PER3P56645 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.3□□□□□ -1.56
PER3P56645 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.3□□□□□ -1.56
PER3P56645 AC008759.1-201ENST00000589783 983 ntBASIC5.3□□□□□ -1.56
PER3P56645 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PER3P56645 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.3□□□□□ -1.56
PER3P56645 AC006363.1-201ENST00000603806 463 ntBASIC5.3□□□□□ -1.56
PER3P56645 AL391497.1-201ENST00000608671 547 ntBASIC5.3□□□□□ -1.56
PER3P56645 uc_338.26-201ENST00000612659 160 ntBASIC5.3□□□□□ -1.56
PER3P56645 AL139099.4-201ENST00000614802 114 ntBASIC5.3□□□□□ -1.56
PER3P56645 AC009509.4-201ENST00000619202 509 ntBASIC5.3□□□□□ -1.56
PER3P56645 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PER3P56645 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.3□□□□□ -1.56
PER3P56645 AC135068.5-201ENST00000624197 983 ntBASIC5.3□□□□□ -1.56
PER3P56645 AL392088.2-201ENST00000637607 285 ntBASIC5.3□□□□□ -1.56
PER3P56645 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PER3P56645 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PER3P56645 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.3□□□□□ -1.56
PER3P56645 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PER3P56645 AL356473.1-201ENST00000406203 1408 ntBASIC5.3□□□□□ -1.56
PER3P56645 AP001029.2-203ENST00000589795 4910 ntBASIC5.3□□□□□ -1.56
PER3P56645 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.3□□□□□ -1.56
PER3P56645 AC015813.6-201ENST00000624409 5808 ntBASIC5.29□□□□□ -1.56
PER3P56645 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PER3P56645 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PER3P56645 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PER3P56645 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.29□□□□□ -1.56
PER3P56645 MFSD8-219ENST00000641228 2559 ntBASIC5.29□□□□□ -1.56
PER3P56645 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PER3P56645 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.29□□□□□ -1.56
PER3P56645 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PER3P56645 AL603750.1-201ENST00000624216 1717 ntBASIC5.29□□□□□ -1.56
PER3P56645 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PER3P56645 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.29□□□□□ -1.56
PER3P56645 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PER3P56645 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PER3P56645 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PER3P56645 RNA5SP394-201ENST00000364216 119 ntBASIC5.29□□□□□ -1.56
PER3P56645 AL139098.1-201ENST00000407291 389 ntBASIC5.29□□□□□ -1.56
PER3P56645 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.29□□□□□ -1.56
PER3P56645 BOLA3P4-201ENST00000418151 400 ntBASIC5.29□□□□□ -1.56
PER3P56645 AL121878.1-201ENST00000418638 859 ntBASIC5.29□□□□□ -1.56
PER3P56645 AC127526.2-201ENST00000426436 775 ntBASIC5.29□□□□□ -1.56
PER3P56645 AC099677.3-201ENST00000427081 395 ntBASIC5.29□□□□□ -1.56
PER3P56645 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.29□□□□□ -1.56
PER3P56645 CFL1P1-202ENST00000432948 411 ntBASIC5.29□□□□□ -1.56
PER3P56645 AL445928.1-201ENST00000435545 222 ntBASIC5.29□□□□□ -1.56
PER3P56645 AL031663.1-201ENST00000437445 219 ntBASIC5.29□□□□□ -1.56
PER3P56645 MTCYBP39-201ENST00000437562 491 ntBASIC5.29□□□□□ -1.56
PER3P56645 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.29□□□□□ -1.56
PER3P56645 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.29□□□□□ -1.56
PER3P56645 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.29□□□□□ -1.56
PER3P56645 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.29□□□□□ -1.56
PER3P56645 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.29□□□□□ -1.56
PER3P56645 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.29□□□□□ -1.56
PER3P56645 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.29□□□□□ -1.56
PER3P56645 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.29□□□□□ -1.56
PER3P56645 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.29□□□□□ -1.56
PER3P56645 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.29□□□□□ -1.56
PER3P56645 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
PER3P56645 AC010307.1-201ENST00000467206 836 ntBASIC5.29□□□□□ -1.56
PER3P56645 COPS8P2-201ENST00000473228 627 ntBASIC5.29□□□□□ -1.56
PER3P56645 RPL7P38-201ENST00000488396 739 ntBASIC5.29□□□□□ -1.56
PER3P56645 AC104685.1-201ENST00000502445 371 ntBASIC5.29□□□□□ -1.56
PER3P56645 AC004069.2-201ENST00000505438 1114 ntBASIC5.29□□□□□ -1.56
PER3P56645 MTATP6P22-201ENST00000507369 598 ntBASIC5.29□□□□□ -1.56
PER3P56645 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.29□□□□□ -1.56
PER3P56645 SNORA43.3-201ENST00000517240 103 ntBASIC5.29□□□□□ -1.56
PER3P56645 AC092709.1-201ENST00000521355 1045 ntBASIC5.29□□□□□ -1.56
PER3P56645 HIGD1AP6-201ENST00000521833 279 ntBASIC5.29□□□□□ -1.56
PER3P56645 SMARCE1P4-201ENST00000523647 241 ntBASIC5.29□□□□□ -1.56
PER3P56645 OR5AK1P-201ENST00000524837 922 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms