Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC138393.1-206ENST00000540997 1886 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 TLK1P1-201ENST00000456760 2440 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.64□□□□□ -1.67
HNF4AP41235 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HNF4AP41235 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HNF4AP41235 COX6B1P1-201ENST00000415962 213 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AL590762.4-201ENST00000425885 253 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.64□□□□□ -1.67
HNF4AP41235 HSFY7P-201ENST00000432672 318 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 HSFY8P-201ENST00000437934 318 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 RPS7P5-201ENST00000441482 581 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 HSFY5P-201ENST00000453726 309 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AL445433.1-201ENST00000457507 257 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.64□□□□□ -1.67
HNF4AP41235 RN7SL610P-201ENST00000463845 291 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AC015908.1-201ENST00000478739 476 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 RN7SL826P-201ENST00000479724 288 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AC010374.1-201ENST00000503762 1237 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.64□□□□□ -1.67
HNF4AP41235 MTND3P24-201ENST00000506306 329 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HNF4AP41235 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.64□□□□□ -1.67
HNF4AP41235 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HNF4AP41235 BUD31P1-201ENST00000521828 359 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.64□□□□□ -1.67
HNF4AP41235 AC087477.6-201ENST00000559595 843 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AP001180.3-201ENST00000582221 145 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.64□□□□□ -1.67
HNF4AP41235 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.64□□□□□ -1.67
HNF4AP41235 KATNBL1P5-201ENST00000605015 517 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 AC099669.2-201ENST00000616549 437 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HNF4AP41235 A2MP1-204ENST00000566278 4130 ntBASIC4.64□□□□□ -1.67
HNF4AP41235 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HNF4AP41235 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.64□□□□□ -1.67
HNF4AP41235 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HNF4AP41235 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HNF4AP41235 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 ZFRP1-201ENST00000457579 2970 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 AP001002.1-201ENST00000625148 1513 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HNF4AP41235 RNA5SP191-201ENST00000362585 102 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HNF4AP41235 AL592291.1-201ENST00000403830 352 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.63□□□□□ -1.67
HNF4AP41235 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.63□□□□□ -1.67
HNF4AP41235 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 PNRC2P1-201ENST00000423940 420 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 MORF4L1P7-201ENST00000426038 703 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.63□□□□□ -1.67
HNF4AP41235 OR2B7P-201ENST00000429302 934 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.63□□□□□ -1.67
HNF4AP41235 OR52J1P-201ENST00000450596 932 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.63□□□□□ -1.67
HNF4AP41235 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HNF4AP41235 AC108729.2-201ENST00000476543 840 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 S100A11P1-201ENST00000477525 312 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 AL035404.1-201ENST00000497982 568 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 AC083829.1-201ENST00000503756 657 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.63□□□□□ -1.67
HNF4AP41235 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 RN7SKP283-201ENST00000517197 270 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.63□□□□□ -1.67
HNF4AP41235 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.63□□□□□ -1.67
HNF4AP41235 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.63□□□□□ -1.67
HNF4AP41235 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.63□□□□□ -1.67
HNF4AP41235 MIR3934-201ENST00000579806 107 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 AP000919.1-202ENST00000581139 1264 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 AL031320.1-201ENST00000604177 357 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.63□□□□□ -1.67
HNF4AP41235 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HNF4AP41235 AL445528.2-201ENST00000620582 470 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 AC006249.1-201ENST00000621223 471 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HNF4AP41235 U6.107-201ENST00000637108 79 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.63□□□□□ -1.67
HNF4AP41235 MAPK10-263ENST00000641052 4307 ntBASIC4.63□□□□□ -1.67
HNF4AP41235 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HNF4AP41235 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HNF4AP41235 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HNF4AP41235 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HNF4AP41235 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.62□□□□□ -1.67
HNF4AP41235 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms