Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC009313.2-201ENST00000417893 1941 ntBASIC4.06□□□□□ -1.76
RFC3P40938 OR4K17-201ENST00000315543 1032 ntBASIC4.06□□□□□ -1.76
RFC3P40938 RHOT1P2-201ENST00000366423 333 ntBASIC4.06□□□□□ -1.76
RFC3P40938 RNU6-225P-201ENST00000384613 103 ntBASIC4.06□□□□□ -1.76
RFC3P40938 RPS20P14-201ENST00000412545 360 ntBASIC4.06□□□□□ -1.76
RFC3P40938 RAC1P3-201ENST00000416129 580 ntBASIC4.06□□□□□ -1.76
RFC3P40938 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.06□□□□□ -1.76
RFC3P40938 AC004975.1-201ENST00000428733 208 ntBASIC4.06□□□□□ -1.76
RFC3P40938 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.06□□□□□ -1.76
RFC3P40938 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFC3P40938 AL353597.2-202ENST00000434901 373 ntBASIC4.06□□□□□ -1.76
RFC3P40938 MRPL48P1-201ENST00000445390 636 ntBASIC4.06□□□□□ -1.76
RFC3P40938 NUTF2P3-201ENST00000448540 384 ntBASIC4.06□□□□□ -1.76
RFC3P40938 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.06□□□□□ -1.76
RFC3P40938 AC012671.1-201ENST00000451912 203 ntBASIC4.06□□□□□ -1.76
RFC3P40938 AL354710.1-201ENST00000453641 246 ntBASIC4.06□□□□□ -1.76
RFC3P40938 RN7SL98P-201ENST00000462271 300 ntBASIC4.06□□□□□ -1.76
RFC3P40938 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.06□□□□□ -1.76
RFC3P40938 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RFC3P40938 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.06□□□□□ -1.76
RFC3P40938 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.06□□□□□ -1.76
RFC3P40938 CYCSP29-201ENST00000533731 318 ntBASIC4.06□□□□□ -1.76
RFC3P40938 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.06□□□□□ -1.76
RFC3P40938 AC136624.4-201ENST00000573044 370 ntBASIC4.06□□□□□ -1.76
RFC3P40938 SLC25A36P1-201ENST00000590111 465 ntBASIC4.06□□□□□ -1.76
RFC3P40938 IPO5P1-202ENST00000600039 287 ntBASIC4.06□□□□□ -1.76
RFC3P40938 AC103792.1-201ENST00000603591 919 ntBASIC4.06□□□□□ -1.76
RFC3P40938 AC020910.2-201ENST00000603635 610 ntBASIC4.06□□□□□ -1.76
RFC3P40938 MIR6716-201ENST00000613413 80 ntBASIC4.06□□□□□ -1.76
RFC3P40938 AC068831.8-201ENST00000620171 435 ntBASIC4.06□□□□□ -1.76
RFC3P40938 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RFC3P40938 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RFC3P40938 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.06□□□□□ -1.76
RFC3P40938 CPHL1P-201ENST00000461341 3407 ntBASIC4.06□□□□□ -1.76
RFC3P40938 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFC3P40938 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RFC3P40938 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.06□□□□□ -1.76
RFC3P40938 IQCB2P-201ENST00000401788 1633 ntBASIC4.06□□□□□ -1.76
RFC3P40938 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.06□□□□□ -1.76
RFC3P40938 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFC3P40938 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RFC3P40938 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RFC3P40938 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.05□□□□□ -1.76
RFC3P40938 AC139769.1-204ENST00000472297 1931 ntBASIC4.05□□□□□ -1.76
RFC3P40938 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.05□□□□□ -1.76
RFC3P40938 AC074029.4-201ENST00000624796 1859 ntBASIC4.05□□□□□ -1.76
RFC3P40938 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.05□□□□□ -1.76
RFC3P40938 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 AC090971.4-201ENST00000560291 1800 ntBASIC4.05□□□□□ -1.76
RFC3P40938 MIR331-201ENST00000362302 94 ntBASIC4.05□□□□□ -1.76
RFC3P40938 AL356967.1-201ENST00000406305 431 ntBASIC4.05□□□□□ -1.76
RFC3P40938 AL603766.1-201ENST00000407763 664 ntBASIC4.05□□□□□ -1.76
RFC3P40938 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 AL590806.1-201ENST00000415818 853 ntBASIC4.05□□□□□ -1.76
RFC3P40938 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.05□□□□□ -1.76
RFC3P40938 BX119904.1-201ENST00000432026 348 ntBASIC4.05□□□□□ -1.76
RFC3P40938 ELOCP10-201ENST00000440624 327 ntBASIC4.05□□□□□ -1.76
RFC3P40938 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.05□□□□□ -1.76
RFC3P40938 AL451050.1-201ENST00000450126 415 ntBASIC4.05□□□□□ -1.76
RFC3P40938 NUTF2P7-201ENST00000453086 375 ntBASIC4.05□□□□□ -1.76
RFC3P40938 RPL7AP52-201ENST00000458096 790 ntBASIC4.05□□□□□ -1.76
RFC3P40938 RPS26P28-201ENST00000470806 348 ntBASIC4.05□□□□□ -1.76
RFC3P40938 RPS4XP18-201ENST00000495480 763 ntBASIC4.05□□□□□ -1.76
RFC3P40938 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.05□□□□□ -1.76
RFC3P40938 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.05□□□□□ -1.76
RFC3P40938 RNA5SP497-201ENST00000516081 97 ntBASIC4.05□□□□□ -1.76
RFC3P40938 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.05□□□□□ -1.76
RFC3P40938 AP000827.1-201ENST00000527814 258 ntBASIC4.05□□□□□ -1.76
RFC3P40938 TOMM20P2-201ENST00000540082 421 ntBASIC4.05□□□□□ -1.76
RFC3P40938 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.05□□□□□ -1.76
RFC3P40938 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.76
RFC3P40938 BMS1P7-201ENST00000602440 1052 ntBASIC4.05□□□□□ -1.76
RFC3P40938 ELOCP34-201ENST00000604436 327 ntBASIC4.05□□□□□ -1.76
RFC3P40938 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.05□□□□□ -1.76
RFC3P40938 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RFC3P40938 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RFC3P40938 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.04□□□□□ -1.76
RFC3P40938 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFC3P40938 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
RFC3P40938 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RFC3P40938 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
RFC3P40938 EOGT-210ENST00000615922 1931 ntBASIC4.04□□□□□ -1.76
RFC3P40938 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RFC3P40938 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RFC3P40938 RNU6-984P-201ENST00000363236 109 ntBASIC4.04□□□□□ -1.76
RFC3P40938 SDHCP2-201ENST00000398565 501 ntBASIC4.04□□□□□ -1.76
RFC3P40938 HSPD1P16-201ENST00000402302 394 ntBASIC4.04□□□□□ -1.76
RFC3P40938 RNA5SP39-201ENST00000411245 120 ntBASIC4.04□□□□□ -1.76
RFC3P40938 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.04□□□□□ -1.76
RFC3P40938 RAD23BP1-201ENST00000421404 1227 ntBASIC4.04□□□□□ -1.76
RFC3P40938 DYNLL1P7-201ENST00000429273 258 ntBASIC4.04□□□□□ -1.76
RFC3P40938 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms