Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 SNORA73.2-201ENST00000364946 201 ntBASIC5.3□□□□□ -1.56
RFC4P35249 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.3□□□□□ -1.56
RFC4P35249 AL691449.1-201ENST00000426570 421 ntBASIC5.3□□□□□ -1.56
RFC4P35249 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.3□□□□□ -1.56
RFC4P35249 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 OR52Y1P-201ENST00000452418 828 ntBASIC5.3□□□□□ -1.56
RFC4P35249 MTND6P32-201ENST00000457611 483 ntBASIC5.3□□□□□ -1.56
RFC4P35249 RPL38P1-201ENST00000460914 211 ntBASIC5.3□□□□□ -1.56
RFC4P35249 ACTR3P3-201ENST00000480448 893 ntBASIC5.3□□□□□ -1.56
RFC4P35249 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.3□□□□□ -1.56
RFC4P35249 PGBD4P4-201ENST00000509673 613 ntBASIC5.3□□□□□ -1.56
RFC4P35249 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.3□□□□□ -1.56
RFC4P35249 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.3□□□□□ -1.56
RFC4P35249 AC006064.5-201ENST00000541782 248 ntBASIC5.3□□□□□ -1.56
RFC4P35249 LSM3P2-201ENST00000551246 273 ntBASIC5.3□□□□□ -1.56
RFC4P35249 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.3□□□□□ -1.56
RFC4P35249 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.3□□□□□ -1.56
RFC4P35249 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.3□□□□□ -1.56
RFC4P35249 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.3□□□□□ -1.56
RFC4P35249 AL135786.2-201ENST00000608422 615 ntBASIC5.3□□□□□ -1.56
RFC4P35249 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.3□□□□□ -1.56
RFC4P35249 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RFC4P35249 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.3□□□□□ -1.56
RFC4P35249 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFC4P35249 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFC4P35249 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC4P35249 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFC4P35249 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC4P35249 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC4P35249 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.29□□□□□ -1.56
RFC4P35249 MIR921-201ENST00000401133 56 ntBASIC5.29□□□□□ -1.56
RFC4P35249 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFC4P35249 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC4P35249 PDSS1P1-201ENST00000422953 1114 ntBASIC5.29□□□□□ -1.56
RFC4P35249 OR2AH1P-201ENST00000425717 928 ntBASIC5.29□□□□□ -1.56
RFC4P35249 HSPE1P16-201ENST00000426640 348 ntBASIC5.29□□□□□ -1.56
RFC4P35249 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.29□□□□□ -1.56
RFC4P35249 NOTCH2P1-201ENST00000443481 624 ntBASIC5.29□□□□□ -1.56
RFC4P35249 AL157884.3-201ENST00000448273 1184 ntBASIC5.29□□□□□ -1.56
RFC4P35249 FCF1P7-201ENST00000451185 558 ntBASIC5.29□□□□□ -1.56
RFC4P35249 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC4P35249 AC069304.1-201ENST00000491593 704 ntBASIC5.29□□□□□ -1.56
RFC4P35249 HMGB3P16-201ENST00000508037 287 ntBASIC5.29□□□□□ -1.56
RFC4P35249 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC4P35249 RN7SL435P-201ENST00000584418 282 ntBASIC5.29□□□□□ -1.56
RFC4P35249 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.29□□□□□ -1.56
RFC4P35249 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFC4P35249 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFC4P35249 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.29□□□□□ -1.56
RFC4P35249 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RFC4P35249 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.29□□□□□ -1.56
RFC4P35249 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RFC4P35249 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RFC4P35249 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.28□□□□□ -1.56
RFC4P35249 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC4P35249 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.28□□□□□ -1.56
RFC4P35249 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RFC4P35249 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.28□□□□□ -1.56
RFC4P35249 RNA5SP119-201ENST00000362715 117 ntBASIC5.28□□□□□ -1.56
RFC4P35249 OR13C3-201ENST00000374781 1108 ntBASIC5.28□□□□□ -1.56
RFC4P35249 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
RFC4P35249 CTSL3P-202ENST00000412179 788 ntBASIC5.28□□□□□ -1.56
RFC4P35249 HSPE1P12-201ENST00000412576 301 ntBASIC5.28□□□□□ -1.56
RFC4P35249 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC4P35249 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.28□□□□□ -1.56
RFC4P35249 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC4P35249 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.28□□□□□ -1.56
RFC4P35249 NPM1P39-201ENST00000449818 867 ntBASIC5.28□□□□□ -1.56
RFC4P35249 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.28□□□□□ -1.56
RFC4P35249 ATP5G1P3-201ENST00000463301 410 ntBASIC5.28□□□□□ -1.56
RFC4P35249 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC4P35249 RN7SKP141-201ENST00000516167 338 ntBASIC5.28□□□□□ -1.56
RFC4P35249 OR4A2P-201ENST00000527276 913 ntBASIC5.28□□□□□ -1.56
RFC4P35249 AC025423.2-201ENST00000537570 439 ntBASIC5.28□□□□□ -1.56
RFC4P35249 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC4P35249 AC012468.1-201ENST00000604888 430 ntBASIC5.28□□□□□ -1.56
RFC4P35249 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFC4P35249 MIR7151-201ENST00000617477 60 ntBASIC5.28□□□□□ -1.56
RFC4P35249 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.28□□□□□ -1.56
RFC4P35249 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
RFC4P35249 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.28□□□□□ -1.56
RFC4P35249 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RFC4P35249 HCFC2P1-201ENST00000392864 1592 ntBASIC5.28□□□□□ -1.56
RFC4P35249 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC4P35249 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.28□□□□□ -1.56
RFC4P35249 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC4P35249 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.28□□□□□ -1.56
RFC4P35249 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RFC4P35249 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.27□□□□□ -1.57
RFC4P35249 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC4P35249 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC4P35249 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RFC4P35249 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC4P35249 BMS1P3-201ENST00000372011 932 ntBASIC5.27□□□□□ -1.57
RFC4P35249 AC104297.1-201ENST00000393779 870 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms