Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 AL606662.1-201ENST00000445763 553 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 YWHAQP9-201ENST00000445891 512 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 MTCO2P25-201ENST00000447065 681 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC104306.1-201ENST00000449702 371 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 HIGD1AP8-201ENST00000453927 274 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 RFC5P1-201ENST00000454419 874 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC091685.2-201ENST00000454924 864 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 RPL5P24-201ENST00000463742 885 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC097484.1-201ENST00000471148 389 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 RPL7P18-201ENST00000478965 734 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 VPS26AP1-201ENST00000483197 979 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC073358.1-201ENST00000505671 684 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC093815.1-201ENST00000508637 280 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 Y_RNA.655-201ENST00000515919 96 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC018442.3-201ENST00000523025 183 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC084824.1-201ENST00000550917 1005 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC116553.2-201ENST00000564203 463 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 VN1R82P-201ENST00000601481 356 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AL139124.1-201ENST00000609123 421 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC244107.2-201ENST00000611773 76 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC122133.1-201ENST00000613964 233 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC015712.7-201ENST00000615211 635 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC073530.2-201ENST00000623987 261 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC016717.3-201ENST00000624730 554 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AL353662.3-201ENST00000625131 237 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC135068.12-201ENST00000637370 931 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AP002512.4-202ENST00000641599 4530 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.46□□□□□ -1.54
TDP1Q9NUW8 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.46□□□□□ -1.54
TDP1Q9NUW8 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AL445523.1-201ENST00000451184 1362 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 RNU6-619P-201ENST00000365146 108 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 OR52E6-202ENST00000379946 954 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 U3.28-201ENST00000391249 210 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AL021407.1-201ENST00000404531 386 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 RPL37P18-201ENST00000411602 243 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 RPS24P8-201ENST00000431490 402 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 FTLP19-201ENST00000433300 394 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 SEPT7P5-201ENST00000434048 306 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC093155.1-201ENST00000440164 826 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 GTF3AP5-201ENST00000442645 697 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 MTCO2P7-201ENST00000446518 666 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 COX6CP18-201ENST00000448769 222 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC097262.1-201ENST00000452559 548 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 HMGB1P4-201ENST00000455362 567 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC092754.2-201ENST00000463506 460 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 SYPL1P1-201ENST00000473622 768 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 SNRPCP3-201ENST00000474888 476 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 GLUD1P3-202ENST00000508551 200 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 MTCYBP16-201ENST00000509187 1129 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC079395.1-201ENST00000510981 262 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC010587.2-201ENST00000511727 448 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC087808.1-201ENST00000520501 361 ntBASIC5.45□□□□□ -1.54
TDP1Q9NUW8 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TDP1Q9NUW8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms