Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.65□□□□□ -1.67
SIX2Q9NPC8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SIX2Q9NPC8 AC104118.1-201ENST00000607625 1589 ntBASIC4.65□□□□□ -1.67
SIX2Q9NPC8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SIX2Q9NPC8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 RNA5SP28-201ENST00000363841 119 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 SNORA11F-201ENST00000408237 128 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 CYCSP10-201ENST00000417973 294 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AL138787.1-202ENST00000437804 898 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 RNFT1P2-201ENST00000443064 757 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 MTCO3P27-201ENST00000514397 196 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AC110760.3-202ENST00000515177 371 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 CYP4A43P-201ENST00000568156 121 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AC113403.1-201ENST00000604910 193 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AL158050.2-201ENST00000605336 568 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AC090912.3-201ENST00000609775 533 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 uc_338.13-201ENST00000618243 179 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AC090617.9-201ENST00000623751 147 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 FRG1DP-201ENST00000635586 771 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AL445984.1-201ENST00000637834 659 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 MAPK10-320ENST00000641462 6696 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 AL137100.1-201ENST00000556703 1620 ntBASIC4.64□□□□□ -1.67
SIX2Q9NPC8 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SIX2Q9NPC8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC083843.2-201ENST00000568248 6253 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AL442128.2-201ENST00000620246 1824 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 RNA5SP175-201ENST00000364275 119 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 OR13C3-201ENST00000374781 1108 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 RPS3AP23-201ENST00000401762 784 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 NACAP7-201ENST00000407371 609 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 NRBF2P2-201ENST00000413087 861 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC119751.6-201ENST00000416712 186 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AL157831.1-201ENST00000426134 473 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AK3P4-201ENST00000504283 583 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC093720.1-201ENST00000505681 714 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC025674.1-201ENST00000507074 324 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 PGBD4P4-201ENST00000509673 613 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 RN7SKP92-201ENST00000517266 244 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 OR5AN2P-201ENST00000534535 896 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC069240.1-201ENST00000548774 375 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.63□□□□□ -1.67
SIX2Q9NPC8 BMS1P7-201ENST00000602440 1052 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 AC096947.1-201ENST00000603233 470 ntBASIC4.63□□□□□ -1.67
SIX2Q9NPC8 MIR432-201ENST00000606207 94 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms