Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 CYB5AP5-201ENST00000549779 389 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 NMNAT1P1-201ENST00000554095 876 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 BNIP3P40-201ENST00000596017 556 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 VN1R87P-201ENST00000596706 487 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 PSMA6P4-201ENST00000603247 718 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC123786.2-201ENST00000603459 275 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 ELOCP34-201ENST00000604436 327 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC018754.1-201ENST00000607486 925 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC016597.2-201ENST00000613256 341 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC022079.2-201ENST00000619739 566 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 LINC01808-202ENST00000641680 1116 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AL645568.2-201ENST00000432815 1337 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 MFSD8-216ENST00000641147 4009 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AP000756.2-201ENST00000624168 2567 ntBASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
POLR1BQ9H9Y6 AC009229.4-201ENST00000623854 1947 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 MIR122-201ENST00000385044 85 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 SNORD65C-201ENST00000390962 71 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 SNORA68.2-201ENST00000391263 128 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 MTND4P11-201ENST00000417020 1058 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 HSFY1P1-201ENST00000423928 1178 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 NPM1P33-201ENST00000438918 872 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AL450263.2-201ENST00000439400 589 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AL137845.2-201ENST00000444292 988 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 TRBV8-2-201ENST00000475637 270 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 RN7SL319P-201ENST00000480656 221 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 RNU6-347P-201ENST00000516658 105 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC105031.1-201ENST00000518550 476 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 MIR4284-201ENST00000578924 81 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC010200.2-201ENST00000605098 235 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 MIR7703-201ENST00000620784 77 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC099654.9-201ENST00000637055 678 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 PHKBP1-201ENST00000450951 1951 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 NSRP1P1-201ENST00000444067 1693 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 AL133268.1-201ENST00000405676 1401 ntBASIC4.89□□□□□ -1.63
POLR1BQ9H9Y6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 AL118496.1-201ENST00000440201 1812 ntBASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
POLR1BQ9H9Y6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms