Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.41□□□□□ -1.7
SLC1A1P43005 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC1A1P43005 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC1A1P43005 ELOCP28-201ENST00000590044 317 ntBASIC4.41□□□□□ -1.7
SLC1A1P43005 AL139286.1-201ENST00000604465 483 ntBASIC4.41□□□□□ -1.7
SLC1A1P43005 AC012603.1-201ENST00000606424 528 ntBASIC4.41□□□□□ -1.7
SLC1A1P43005 AC074276.2-201ENST00000619891 348 ntBASIC4.41□□□□□ -1.7
SLC1A1P43005 AL445363.3-201ENST00000623080 671 ntBASIC4.41□□□□□ -1.7
SLC1A1P43005 AP002967.1-201ENST00000624203 539 ntBASIC4.41□□□□□ -1.7
SLC1A1P43005 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC1A1P43005 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SLC1A1P43005 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC1A1P43005 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SLC1A1P43005 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SLC1A1P43005 AL137100.1-201ENST00000556703 1620 ntBASIC4.4□□□□□ -1.7
SLC1A1P43005 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SLC1A1P43005 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.4□□□□□ -1.7
SLC1A1P43005 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SLC1A1P43005 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC1A1P43005 SNORA37-201ENST00000384504 129 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SLC1A1P43005 RNA5SP332-201ENST00000391063 115 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 AP000357.1-201ENST00000409926 1165 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 AC069213.2-201ENST00000420238 366 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 MTND4LP13-201ENST00000425022 298 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC1A1P43005 EEF1A1P1-201ENST00000447052 739 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC1A1P43005 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC1A1P43005 RPL23AP72-201ENST00000492447 435 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 AC231760.1-201ENST00000498002 260 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC1A1P43005 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC1A1P43005 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC1A1P43005 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
SLC1A1P43005 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC1A1P43005 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC1A1P43005 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC1A1P43005 AC090312.1-201ENST00000580637 348 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC1A1P43005 AC005191.1-201ENST00000603950 358 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 AC023813.4-201ENST00000607580 580 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC1A1P43005 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC1A1P43005 MFSD8-216ENST00000641147 4009 ntBASIC4.4□□□□□ -1.71
SLC1A1P43005 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC1A1P43005 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC1A1P43005 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SLC1A1P43005 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC1A1P43005 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC1A1P43005 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SLC1A1P43005 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SLC1A1P43005 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC1A1P43005 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC1A1P43005 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC1A1P43005 USP9YP4-201ENST00000424401 1745 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC1A1P43005 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC1A1P43005 RNA5SP36-201ENST00000410197 133 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 RPL6P29-201ENST00000414863 865 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SLC1A1P43005 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC1A1P43005 MFSD13B-201ENST00000420133 1290 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC1A1P43005 AL035551.1-201ENST00000446931 348 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 RPL36AP13-201ENST00000457490 317 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 RPL35P6-201ENST00000490024 372 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 RN7SL691P-201ENST00000494487 301 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.39□□□□□ -1.71
SLC1A1P43005 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC1A1P43005 AC139783.2-201ENST00000504847 1145 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 PGBD4P4-201ENST00000509673 613 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SLC1A1P43005 AC010476.1-201ENST00000519111 851 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC1A1P43005 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC1A1P43005 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.39□□□□□ -1.71
SLC1A1P43005 AC024940.4-201ENST00000605507 246 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 AC012213.4-201ENST00000606457 354 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 AC019193.2-201ENST00000610012 634 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 AC100827.5-201ENST00000615883 426 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC1A1P43005 AC233309.1-201ENST00000619522 751 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SLC1A1P43005 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC1A1P43005 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC1A1P43005 AL158163.1-201ENST00000603915 1649 ntBASIC4.39□□□□□ -1.71
SLC1A1P43005 SYT14P1-202ENST00000600441 1448 ntBASIC4.38□□□□□ -1.71
SLC1A1P43005 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC1A1P43005 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC1A1P43005 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SLC1A1P43005 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC1A1P43005 RNU4-7P-201ENST00000364758 141 ntBASIC4.38□□□□□ -1.71
SLC1A1P43005 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC1A1P43005 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC1A1P43005 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC1A1P43005 AC093084.1-201ENST00000424233 687 ntBASIC4.38□□□□□ -1.71
SLC1A1P43005 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC1A1P43005 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC1A1P43005 AC022022.1-201ENST00000430304 178 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms