Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.66□□□□□ -1.66
HNF4AP41235 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HNF4AP41235 OR52E6-202ENST00000379946 954 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.66□□□□□ -1.66
HNF4AP41235 AC114755.2-201ENST00000413520 361 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 AC114814.2-201ENST00000419195 485 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 E2F6P2-201ENST00000420708 748 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.66□□□□□ -1.66
HNF4AP41235 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 AC093414.1-201ENST00000434712 514 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AC004938.1-201ENST00000438468 308 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 RPL12P3-201ENST00000440080 396 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.66□□□□□ -1.66
HNF4AP41235 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.66□□□□□ -1.66
HNF4AP41235 AL353718.1-201ENST00000451028 517 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AC010733.1-201ENST00000451515 401 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 RN7SL329P-201ENST00000467740 299 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.66□□□□□ -1.66
HNF4AP41235 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.66□□□□□ -1.66
HNF4AP41235 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 TCP11X3P-202ENST00000514289 1254 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 RNA5SP392-201ENST00000516905 112 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.66□□□□□ -1.66
HNF4AP41235 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.66□□□□□ -1.66
HNF4AP41235 OR5AZ1P-201ENST00000527448 943 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HNF4AP41235 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.66□□□□□ -1.66
HNF4AP41235 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.66□□□□□ -1.66
HNF4AP41235 MIR4436B2-201ENST00000581415 91 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.66□□□□□ -1.66
HNF4AP41235 MIR4436B1-201ENST00000583272 91 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.66□□□□□ -1.66
HNF4AP41235 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.66□□□□□ -1.66
HNF4AP41235 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.66□□□□□ -1.66
HNF4AP41235 AL391001.1-201ENST00000602747 715 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AL450270.1-201ENST00000606160 391 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AP001033.2-201ENST00000609701 1003 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 AC097505.1-201ENST00000610199 565 ntBASIC4.66□□□□□ -1.66
HNF4AP41235 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.66□□□□□ -1.66
HNF4AP41235 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.66□□□□□ -1.66
HNF4AP41235 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.66□□□□□ -1.66
HNF4AP41235 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.66□□□□□ -1.66
HNF4AP41235 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HNF4AP41235 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.65□□□□□ -1.66
HNF4AP41235 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.65□□□□□ -1.66
HNF4AP41235 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HNF4AP41235 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HNF4AP41235 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
HNF4AP41235 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HNF4AP41235 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.65□□□□□ -1.67
HNF4AP41235 LINC00993-201ENST00000420453 540 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.65□□□□□ -1.67
HNF4AP41235 AC007394.1-201ENST00000421941 531 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 RPS17P8-201ENST00000434525 335 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.65□□□□□ -1.67
HNF4AP41235 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.65□□□□□ -1.67
HNF4AP41235 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.65□□□□□ -1.67
HNF4AP41235 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.65□□□□□ -1.67
HNF4AP41235 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HNF4AP41235 GAPDHP56-201ENST00000506031 988 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 NDUFB5P1-201ENST00000508134 564 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC025768.1-201ENST00000510057 267 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC110792.2-201ENST00000510278 224 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 AC021006.3-201ENST00000530771 192 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.65□□□□□ -1.67
HNF4AP41235 AC008033.2-201ENST00000542626 177 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.65□□□□□ -1.67
HNF4AP41235 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.65□□□□□ -1.67
HNF4AP41235 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.65□□□□□ -1.67
HNF4AP41235 NTAN1P1-201ENST00000603150 646 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 RNF138P2-201ENST00000603490 592 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC020910.3-201ENST00000603701 874 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC010680.4-201ENST00000605334 543 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC007497.1-201ENST00000610421 561 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.65□□□□□ -1.67
HNF4AP41235 AC112694.2-201ENST00000623697 768 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HNF4AP41235 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HNF4AP41235 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HNF4AP41235 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 DCAF13P3-201ENST00000561147 1334 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.65□□□□□ -1.67
HNF4AP41235 AC015813.6-201ENST00000624409 5808 ntBASIC4.65□□□□□ -1.67
HNF4AP41235 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
HNF4AP41235 MTND5P11-201ENST00000511037 1812 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms