Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MORF4L2P1-201ENST00000503761 858 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.94□□□□□ -1.62
BRCA1P38398 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC093853.1-201ENST00000515689 483 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA1P38398 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC068993.1-201ENST00000546724 589 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC107993.1-201ENST00000591343 684 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 AC244505.7-201ENST00000599675 272 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
BRCA1P38398 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 RNU1-44P-201ENST00000384453 163 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA1P38398 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRCA1P38398 AC138832.1-201ENST00000522871 556 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.94□□□□□ -1.62
BRCA1P38398 AC091905.2-201ENST00000623143 306 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 MAPK10-286ENST00000641208 8747 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 AC000374.1-201ENST00000434698 1745 ntBASIC4.94□□□□□ -1.62
BRCA1P38398 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA1P38398 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
BRCA1P38398 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA1P38398 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA1P38398 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
BRCA1P38398 AL132656.3-201ENST00000606384 1595 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.93□□□□□ -1.62
BRCA1P38398 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA1P38398 UBTFL3-201ENST00000418934 1024 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 TCEA1P2-201ENST00000420496 906 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA1P38398 AC104849.1-201ENST00000462623 405 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 RPS4XP10-201ENST00000465034 731 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 UBTFL6-201ENST00000477929 1024 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCA1P38398 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCA1P38398 CYCSP30-201ENST00000546447 172 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.93□□□□□ -1.62
BRCA1P38398 RNU1-30P-201ENST00000606575 163 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA1P38398 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA1P38398 AC104623.2-202ENST00000623477 4002 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 CDY11P-201ENST00000447168 1651 ntBASIC4.93□□□□□ -1.62
BRCA1P38398 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA1P38398 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BRCA1P38398 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BRCA1P38398 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA1P38398 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
BRCA1P38398 AL078604.1-201ENST00000404609 466 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 EIF4A1P1-201ENST00000420241 934 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.92□□□□□ -1.62
BRCA1P38398 RPL23AP37-201ENST00000479658 549 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 AC090013.1-201ENST00000485147 480 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.92□□□□□ -1.62
BRCA1P38398 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCA1P38398 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.92□□□□□ -1.62
BRCA1P38398 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA1P38398 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA1P38398 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA1P38398 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
BRCA1P38398 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCA1P38398 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA1P38398 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCA1P38398 NPM1P38-201ENST00000403835 865 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCA1P38398 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.92□□□□□ -1.62
BRCA1P38398 AC090589.1-201ENST00000473109 362 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
BRCA1P38398 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCA1P38398 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.92□□□□□ -1.62
BRCA1P38398 AC087369.1-201ENST00000520775 996 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.92□□□□□ -1.62
BRCA1P38398 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.92□□□□□ -1.62
BRCA1P38398 AC011816.2-201ENST00000607089 556 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 MIR8058-201ENST00000615737 89 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 AL645927.2-201ENST00000618350 349 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 AC243312.2-201ENST00000623340 601 ntBASIC4.92□□□□□ -1.62
BRCA1P38398 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA1P38398 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA1P38398 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA1P38398 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BRCA1P38398 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
BRCA1P38398 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA1P38398 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BRCA1P38398 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
BRCA1P38398 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
BRCA1P38398 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms