Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DMAP28067 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DMAP28067 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 RNU1-106P-201ENST00000384382 164 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 RSU1P3-201ENST00000412878 835 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 RCC2P2-201ENST00000422174 918 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC009263.1-201ENST00000441193 1239 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 OR1H1P-201ENST00000448731 937 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 AL356390.1-201ENST00000455684 397 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 RN7SL93P-201ENST00000463035 293 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 IGLV2-34-201ENST00000490007 283 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC092045.1-201ENST00000495716 1231 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC108145.1-201ENST00000503770 153 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 BTF3P13-201ENST00000513224 490 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC022616.2-201ENST00000523185 300 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AP001880.2-201ENST00000538233 448 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 LINC00622-201ENST00000562811 1570 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC009163.6-201ENST00000612367 342 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 MIR6861-201ENST00000618657 64 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DMAP28067 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 NCAPGP1-201ENST00000505112 1814 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 AC096656.1-201ENST00000623826 1364 ntBASIC3.74□□□□□ -1.81
HLA-DMAP28067 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DMAP28067 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 SNORA71.2-201ENST00000364941 134 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 U3.25-201ENST00000391209 220 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC136624.1-201ENST00000400791 413 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC093162.1-201ENST00000419682 124 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 ARAFP1-201ENST00000422172 605 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 IFNNP1-201ENST00000429219 553 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 CNOT7P2-201ENST00000441051 832 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 OR52J1P-201ENST00000450596 932 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 SEPT7P6-201ENST00000469999 1143 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC007016.1-201ENST00000512110 244 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC005798.1-201ENST00000513715 387 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC013701.1-201ENST00000522657 465 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 TOMM20P2-201ENST00000540082 421 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 CBX3P5-201ENST00000552017 521 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AL109741.3-201ENST00000561748 592 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC128687.2-201ENST00000609657 566 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC026124.2-201ENST00000621847 656 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 MIR7702-201ENST00000621931 59 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AC006065.6-201ENST00000625201 545 ntBASIC3.73□□□□□ -1.81
HLA-DMAP28067 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HLA-DMAP28067 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HLA-DMAP28067 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms