Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GNRHR2P1-201ENST00000555315 631 ntBASIC2.46□□□□□ -2.02
APOBP04114 AC022655.2-201ENST00000577280 318 ntBASIC2.46□□□□□ -2.02
APOBP04114 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC2.46□□□□□ -2.02
APOBP04114 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 CYCSP4-201ENST00000429682 331 ntBASIC2.46□□□□□ -2.02
APOBP04114 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC2.46□□□□□ -2.02
APOBP04114 AC083863.1-201ENST00000438811 231 ntBASIC2.46□□□□□ -2.02
APOBP04114 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.46□□□□□ -2.02
APOBP04114 Z75741.1-201ENST00000446793 314 ntBASIC2.46□□□□□ -2.02
APOBP04114 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.46□□□□□ -2.02
APOBP04114 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.46□□□□□ -2.02
APOBP04114 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC2.46□□□□□ -2.02
APOBP04114 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.46□□□□□ -2.02
APOBP04114 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOBP04114 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
APOBP04114 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.45□□□□□ -2.02
APOBP04114 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.45□□□□□ -2.02
APOBP04114 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
APOBP04114 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC2.45□□□□□ -2.02
APOBP04114 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC2.45□□□□□ -2.02
APOBP04114 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC2.45□□□□□ -2.02
APOBP04114 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC2.45□□□□□ -2.02
APOBP04114 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
APOBP04114 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.45□□□□□ -2.02
APOBP04114 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
APOBP04114 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 SNORD17-201ENST00000390930 237 ntBASIC2.45□□□□□ -2.02
APOBP04114 AC006511.1-201ENST00000470614 315 ntBASIC2.45□□□□□ -2.02
APOBP04114 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.45□□□□□ -2.02
APOBP04114 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.45□□□□□ -2.02
APOBP04114 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.45□□□□□ -2.02
APOBP04114 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC2.45□□□□□ -2.02
APOBP04114 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
APOBP04114 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
APOBP04114 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
APOBP04114 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.45□□□□□ -2.02
APOBP04114 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
APOBP04114 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
APOBP04114 AC093815.1-201ENST00000508637 280 ntBASIC2.45□□□□□ -2.02
APOBP04114 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.45□□□□□ -2.02
APOBP04114 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC2.45□□□□□ -2.02
APOBP04114 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.45□□□□□ -2.02
APOBP04114 AC133552.5-201ENST00000604266 540 ntBASIC2.45□□□□□ -2.02
APOBP04114 RNA5SP439-201ENST00000617595 124 ntBASIC2.45□□□□□ -2.02
APOBP04114 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.45□□□□□ -2.02
APOBP04114 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC2.45□□□□□ -2.02
APOBP04114 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
APOBP04114 AC058791.1-201ENST00000608412 3198 ntBASIC2.45□□□□□ -2.02
APOBP04114 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.44□□□□□ -2.02
APOBP04114 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.44□□□□□ -2.02
APOBP04114 MTCO1P45-201ENST00000431457 267 ntBASIC2.44□□□□□ -2.02
APOBP04114 SNORA71B-202ENST00000439232 272 ntBASIC2.44□□□□□ -2.02
APOBP04114 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 RPS4XP12-201ENST00000461747 709 ntBASIC2.44□□□□□ -2.02
APOBP04114 AC010285.3-201ENST00000511668 676 ntBASIC2.44□□□□□ -2.02
APOBP04114 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC2.44□□□□□ -2.02
APOBP04114 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC2.44□□□□□ -2.02
APOBP04114 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.44□□□□□ -2.02
APOBP04114 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
APOBP04114 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC2.44□□□□□ -2.02
APOBP04114 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 AC239868.2-201ENST00000564237 4527 ntBASIC2.44□□□□□ -2.02
APOBP04114 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 DDX18P6-201ENST00000450119 1997 ntBASIC2.44□□□□□ -2.02
APOBP04114 CDY3P-201ENST00000454543 1618 ntBASIC2.44□□□□□ -2.02
APOBP04114 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.44□□□□□ -2.02
APOBP04114 RN7SKP289-201ENST00000517244 295 ntBASIC2.44□□□□□ -2.02
APOBP04114 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC2.44□□□□□ -2.02
APOBP04114 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.44□□□□□ -2.02
APOBP04114 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 AC090246.1-201ENST00000616499 426 ntBASIC2.44□□□□□ -2.02
APOBP04114 ATE1-AS1-202ENST00000636460 506 ntBASIC2.44□□□□□ -2.02
APOBP04114 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
APOBP04114 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.44□□□□□ -2.02
APOBP04114 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.44□□□□□ -2.02
APOBP04114 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
APOBP04114 AP001273.1-201ENST00000624493 3152 ntBASIC2.44□□□□□ -2.02
APOBP04114 RNA5SP187-201ENST00000384400 119 ntBASIC2.44□□□□□ -2.02
APOBP04114 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.44□□□□□ -2.02
APOBP04114 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms