Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SHOX2O60902 A2MP1-204ENST00000566278 4130 ntBASIC4.27□□□□□ -1.73
SHOX2O60902 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.27□□□□□ -1.73
SHOX2O60902 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SHOX2O60902 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHOX2O60902 MARK2P15-201ENST00000432204 2186 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.26□□□□□ -1.73
SHOX2O60902 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.26□□□□□ -1.73
SHOX2O60902 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SHOX2O60902 MIR765-201ENST00000390226 114 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 RPL5P19-201ENST00000404228 893 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 RPS4XP9-201ENST00000405151 780 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 AL512430.2-201ENST00000406786 339 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 AC096644.3-201ENST00000416788 338 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 MTCO1P51-201ENST00000427672 1060 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 C4BPAP2-201ENST00000428434 478 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.26□□□□□ -1.73
SHOX2O60902 OR1H1P-201ENST00000448731 937 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 OR52J1P-201ENST00000450596 932 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 RPS27AP17-201ENST00000463344 455 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.26□□□□□ -1.73
SHOX2O60902 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SHOX2O60902 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.26□□□□□ -1.73
SHOX2O60902 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.26□□□□□ -1.73
SHOX2O60902 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.26□□□□□ -1.73
SHOX2O60902 AP001880.2-201ENST00000538233 448 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.26□□□□□ -1.73
SHOX2O60902 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.26□□□□□ -1.73
SHOX2O60902 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.26□□□□□ -1.73
SHOX2O60902 AL135786.2-201ENST00000608422 615 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 AC022960.2-201ENST00000616300 666 ntBASIC4.26□□□□□ -1.73
SHOX2O60902 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SHOX2O60902 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SHOX2O60902 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SHOX2O60902 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SHOX2O60902 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHOX2O60902 AC012618.3-205ENST00000637896 1496 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.25□□□□□ -1.73
SHOX2O60902 ZNF137P-201ENST00000456718 1920 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.25□□□□□ -1.73
SHOX2O60902 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SHOX2O60902 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHOX2O60902 RNU1-87P-201ENST00000363727 170 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SHOX2O60902 AC019155.1-201ENST00000382242 574 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHOX2O60902 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.25□□□□□ -1.73
SHOX2O60902 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.25□□□□□ -1.73
SHOX2O60902 AC004074.1-201ENST00000421810 1063 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 RPL7P22-201ENST00000466005 733 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.25□□□□□ -1.73
SHOX2O60902 MTND4LP2-201ENST00000502312 285 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.25□□□□□ -1.73
SHOX2O60902 RNU6-1231P-201ENST00000517185 103 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.25□□□□□ -1.73
SHOX2O60902 AC063950.1-201ENST00000552036 308 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.25□□□□□ -1.73
SHOX2O60902 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.25□□□□□ -1.73
SHOX2O60902 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHOX2O60902 AL133457.1-201ENST00000564251 987 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 AL023583.1-201ENST00000607518 1143 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SHOX2O60902 AP002799.1-201ENST00000623552 423 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 AL079305.1-201ENST00000623159 3008 ntBASIC4.25□□□□□ -1.73
SHOX2O60902 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SHOX2O60902 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SHOX2O60902 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SHOX2O60902 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHOX2O60902 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
SHOX2O60902 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SHOX2O60902 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHOX2O60902 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SHOX2O60902 RNA5SP332-201ENST00000391063 115 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 ATP5F1P4-201ENST00000397288 746 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 CHMP1B2P-201ENST00000399581 597 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 AC097374.1-203ENST00000400783 485 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.24□□□□□ -1.73
SHOX2O60902 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.24□□□□□ -1.73
SHOX2O60902 AC096638.2-201ENST00000434965 711 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 YWHAZP2-201ENST00000440317 728 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 RPL23AP93-201ENST00000440847 484 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 AC044797.1-201ENST00000445744 679 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 AL356390.1-201ENST00000455684 397 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 RN7SL738P-201ENST00000470264 297 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.24□□□□□ -1.73
SHOX2O60902 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.24□□□□□ -1.73
SHOX2O60902 IGBP1P5-201ENST00000507524 1000 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.24□□□□□ -1.73
SHOX2O60902 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.24□□□□□ -1.73
SHOX2O60902 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
SHOX2O60902 RNU2-30P-201ENST00000516209 141 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 snoU109.6-201ENST00000516831 118 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.24□□□□□ -1.73
SHOX2O60902 RAB9BP1-201ENST00000519581 626 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.24□□□□□ -1.73
SHOX2O60902 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.24□□□□□ -1.73
SHOX2O60902 AC021006.3-201ENST00000530771 192 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 RFPL1S-203ENST00000539579 330 ntBASIC4.24□□□□□ -1.73
SHOX2O60902 AC008033.2-201ENST00000542626 177 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms