Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 SAMMSON-213ENST00000641336 1521 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AP000568.1-201ENST00000282964 442 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 RNU6-244P-201ENST00000391028 104 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AL024507.1-201ENST00000412741 274 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 RPL21P108-201ENST00000413857 481 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 OR5M12P-201ENST00000423388 929 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AP001324.1-201ENST00000428553 399 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC008379.1-201ENST00000463655 464 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 PPIAP21-201ENST00000464473 501 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC108120.2-201ENST00000512973 294 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 TOMM20P2-201ENST00000540082 421 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC090666.1-201ENST00000578241 445 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC069366.1-201ENST00000583159 838 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC006363.1-201ENST00000603806 463 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 MIR6716-201ENST00000613413 80 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC015914.2-201ENST00000618167 288 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AP003476.1-201ENST00000623984 516 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC099654.8-201ENST00000637757 681 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC073136.1-201ENST00000449426 2884 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC107068.1-201ENST00000563286 4218 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
YIPF1Q9Y548 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 CASC19-206ENST00000641028 1430 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AL606537.1-201ENST00000607258 2011 ntBASIC4.79□□□□□ -1.64
YIPF1Q9Y548 AC019072.1-201ENST00000604535 1551 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC008432.1-201ENST00000615912 1320 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AL359922.3-201ENST00000624779 1670 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 RNU4-74P-201ENST00000411280 161 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 MTCO1P43-201ENST00000431831 488 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 HMGB3P10-201ENST00000434734 572 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC104651.2-201ENST00000447549 528 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 HSPE1P22-201ENST00000456856 327 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC018635.1-201ENST00000468292 1030 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC010618.1-201ENST00000469924 477 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC025459.1-201ENST00000504072 156 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 TPT1P8-201ENST00000510120 555 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 RNA5SP464-201ENST00000516251 108 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 SCARNA1-201ENST00000517138 166 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AP003066.2-201ENST00000529375 555 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 MIR3939-201ENST00000582614 106 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AP001160.4-201ENST00000596971 382 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC020634.1-201ENST00000608701 549 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC008759.3-201ENST00000613300 508 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC068831.8-201ENST00000620171 435 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC010608.3-201ENST00000625048 527 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 AC004808.1-201ENST00000627671 721 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 LINC01808-202ENST00000641680 1116 ntBASIC4.78□□□□□ -1.64
YIPF1Q9Y548 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.78□□□□□ -1.64
YIPF1Q9Y548 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 480.2 ms