Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF6Q9Y252 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF6Q9Y252 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 KPNA2P2-201ENST00000419546 1489 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 AL355852.1-201ENST00000454081 1771 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 HSPD1P11-201ENST00000508643 1702 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 TLK1P1-201ENST00000456760 2440 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 MIR448-201ENST00000362131 111 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 AC068538.1-201ENST00000376856 336 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 Z86062.1-201ENST00000406773 777 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 RPS27AP7-201ENST00000422792 455 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 VDAC1P6-201ENST00000430062 855 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 MTCO3P21-201ENST00000430791 643 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 ARL2BPP10-201ENST00000446487 531 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 RPL7P48-201ENST00000461513 746 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 AC010469.1-201ENST00000463864 576 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 AC025181.1-201ENST00000477507 416 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 AC012158.1-204ENST00000483430 465 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 AC107398.1-201ENST00000486904 505 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 SCARNA22-201ENST00000503991 125 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 IGLV3-26-201ENST00000520756 302 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 PARP1P2-201ENST00000556806 195 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 MIR4277-201ENST00000578298 84 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 RPL7P50-201ENST00000600588 727 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 AL121932.1-201ENST00000605542 214 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 AC016717.3-201ENST00000624730 554 ntBASIC4.3□□□□□ -1.72
RNF6Q9Y252 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RNF6Q9Y252 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF6Q9Y252 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AL450326.2-201ENST00000421913 1962 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF6Q9Y252 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 SNORA70F-201ENST00000384142 135 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 LAP3P1-201ENST00000403648 294 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AL049697.2-201ENST00000403708 294 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 RN7SKP167-201ENST00000411047 285 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 GSTM3P2-201ENST00000412746 530 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 DYNLL1P7-201ENST00000429273 258 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC069285.2-201ENST00000440210 275 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AL691517.1-201ENST00000440833 1235 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 MTND2P3-201ENST00000452458 470 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC092691.2-201ENST00000461787 803 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 RPL5P30-201ENST00000465511 891 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 CCDC75P1-201ENST00000469247 791 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 OR52A4P-201ENST00000472867 958 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 OR52A4P-202ENST00000481634 799 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 RPS27AP16-201ENST00000492222 470 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 IGBP1P5-201ENST00000507524 1000 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 RNU2-30P-201ENST00000516209 141 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC133555.2-201ENST00000550213 292 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC021483.2-201ENST00000567415 758 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC005242.1-201ENST00000585658 438 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AC022726.1-201ENST00000587475 207 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 PSMA6P4-201ENST00000603247 718 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AL355802.4-201ENST00000607635 548 ntBASIC4.29□□□□□ -1.72
RNF6Q9Y252 AL353726.1-201ENST00000614041 1000 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms