Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC092490.3-201ENST00000545370 572 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 BPIFA4P-203ENST00000603168 689 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 MTATP6P2-201ENST00000603319 678 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC004948.1-201ENST00000609858 672 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC016957.2-201ENST00000616998 848 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 AC007546.2-201ENST00000623996 360 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.36□□□□□ -1.71
NDE1Q9NXR1 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NDE1Q9NXR1 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 RNU6-925P-201ENST00000384629 104 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AL031985.1-201ENST00000392713 418 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 RNA5SP178-201ENST00000410380 128 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 MTND4LP13-201ENST00000425022 298 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC133473.1-201ENST00000455173 299 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AL133244.1-201ENST00000456007 258 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 FCF1P6-201ENST00000456841 595 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 SCARNA10-201ENST00000459255 330 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC140172.1-201ENST00000502928 141 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 MRPS33P2-201ENST00000507850 322 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC090281.1-201ENST00000523019 276 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 MTND1P6-201ENST00000523621 946 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 FAM106CP-201ENST00000582212 507 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 FKBP1AP1-201ENST00000594588 318 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC090948.2-201ENST00000607363 564 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC018645.2-201ENST00000609151 472 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 MIR6768-201ENST00000610734 72 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC079395.2-201ENST00000610982 737 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC009269.6-201ENST00000621778 588 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC067852.7-201ENST00000623270 535 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC010872.1-201ENST00000624225 675 ntBASIC4.35□□□□□ -1.71
NDE1Q9NXR1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.35□□□□□ -1.71
NDE1Q9NXR1 AC139769.1-204ENST00000472297 1931 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AP000568.1-201ENST00000282964 442 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AL035405.1-201ENST00000400795 710 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC006065.1-201ENST00000422539 802 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 RNFT1P2-201ENST00000443064 757 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 MTCYBP21-201ENST00000443300 1113 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AL353898.1-201ENST00000444055 238 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 PPIAP19-201ENST00000486414 492 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC093801.2-201ENST00000503966 1050 ntBASIC4.34□□□□□ -1.71
NDE1Q9NXR1 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.34□□□□□ -1.71
NDE1Q9NXR1 RNU6-415P-201ENST00000516252 97 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms