Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 OR9N1P-201ENST00000491296 333 ntBASIC3.76□□□□□ -1.81
FOXF1Q12946 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF1Q12946 AC112184.1-201ENST00000505179 312 ntBASIC3.76□□□□□ -1.81
FOXF1Q12946 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF1Q12946 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXF1Q12946 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF1Q12946 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXF1Q12946 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXF1Q12946 AC015922.4-201ENST00000612568 690 ntBASIC3.76□□□□□ -1.81
FOXF1Q12946 MIR7702-201ENST00000621931 59 ntBASIC3.76□□□□□ -1.81
FOXF1Q12946 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXF1Q12946 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF1Q12946 IQCB2P-201ENST00000401788 1633 ntBASIC3.76□□□□□ -1.81
FOXF1Q12946 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXF1Q12946 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF1Q12946 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF1Q12946 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXF1Q12946 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
FOXF1Q12946 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF1Q12946 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF1Q12946 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXF1Q12946 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF1Q12946 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF1Q12946 OR10J6P-201ENST00000289731 930 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
FOXF1Q12946 AC068538.1-201ENST00000376856 336 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
FOXF1Q12946 RNU11-4P-201ENST00000391149 133 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 AP000357.1-201ENST00000409926 1165 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXF1Q12946 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXF1Q12946 COX6CP15-201ENST00000426313 211 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXF1Q12946 FGF7P3-201ENST00000454645 303 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXF1Q12946 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
FOXF1Q12946 RN7SL604P-201ENST00000492589 296 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXF1Q12946 AC093824.1-201ENST00000508796 343 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 AC006499.6-201ENST00000511169 607 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXF1Q12946 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXF1Q12946 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXF1Q12946 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXF1Q12946 AC006116.5-201ENST00000591936 559 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 MIR7151-201ENST00000617477 60 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 AC074276.2-201ENST00000619891 348 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 RMST_9.1-201ENST00000619945 193 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXF1Q12946 AC009951.1-201ENST00000623674 2614 ntBASIC3.75□□□□□ -1.81
FOXF1Q12946 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
FOXF1Q12946 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF1Q12946 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
FOXF1Q12946 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXF1Q12946 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.75□□□□□ -1.81
FOXF1Q12946 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXF1Q12946 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF1Q12946 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXF1Q12946 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.74□□□□□ -1.81
FOXF1Q12946 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXF1Q12946 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 AC093909.5-201ENST00000621839 1799 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXF1Q12946 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXF1Q12946 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 MIR513A2-201ENST00000385249 127 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 AMZ2P2-201ENST00000406819 1057 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 RN7SKP33-201ENST00000410942 340 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 RNA5SP104-201ENST00000410989 118 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXF1Q12946 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXF1Q12946 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXF1Q12946 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXF1Q12946 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXF1Q12946 AC006011.1-201ENST00000442758 349 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXF1Q12946 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXF1Q12946 RPL29P14-201ENST00000495837 428 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 AC025445.1-201ENST00000502728 300 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 KRT19P6-201ENST00000510983 209 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.74□□□□□ -1.81
FOXF1Q12946 AF186190.1-201ENST00000517470 480 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
FOXF1Q12946 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXF1Q12946 AL356489.2-201ENST00000566968 3528 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXF1Q12946 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
FOXF1Q12946 MIR4675-201ENST00000577898 77 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.74□□□□□ -1.81
FOXF1Q12946 MIR5684-201ENST00000585074 65 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
FOXF1Q12946 AC068790.5-201ENST00000602741 355 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 AL137072.1-201ENST00000603444 466 ntBASIC3.74□□□□□ -1.81
FOXF1Q12946 AC026368.1-201ENST00000614934 690 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms