Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC006518.1-201ENST00000541449 943 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC040958.1-201ENST00000561102 201 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC116553.2-201ENST00000564203 463 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDL3P58872 PRPF19P1-201ENST00000584766 898 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 AL392112.1-201ENST00000605115 829 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 MIR378J-201ENST00000611988 109 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDL3P58872 MIR7641-1-201ENST00000627518 61 ntBASIC5.84□□□□□ -1.47
RHBDL3P58872 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.84□□□□□ -1.47
RHBDL3P58872 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RHBDL3P58872 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RHBDL3P58872 AL592437.2-201ENST00000421655 2434 ntBASIC5.84□□□□□ -1.48
RHBDL3P58872 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.84□□□□□ -1.48
RHBDL3P58872 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.48
RHBDL3P58872 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDL3P58872 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 AC126755.2-208ENST00000327792 462 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AC138969.1-213ENST00000331436 462 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDL3P58872 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDL3P58872 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDL3P58872 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDL3P58872 AL354692.1-201ENST00000423044 315 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.83□□□□□ -1.48
RHBDL3P58872 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDL3P58872 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDL3P58872 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.83□□□□□ -1.48
RHBDL3P58872 AC005002.1-201ENST00000447458 540 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 OR52E3P-201ENST00000452083 936 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.83□□□□□ -1.48
RHBDL3P58872 HMGB3P21-201ENST00000452483 547 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 RPL12P20-201ENST00000475538 479 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDL3P58872 AC073522.1-201ENST00000483312 377 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 AC119751.1-201ENST00000513357 765 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDL3P58872 RNA5SP303-201ENST00000516192 130 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 RN7SKP96-201ENST00000516948 297 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.83□□□□□ -1.48
RHBDL3P58872 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.83□□□□□ -1.48
RHBDL3P58872 OR5M2P-201ENST00000529003 936 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 AC006518.2-201ENST00000542513 940 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 SERPINE4P-201ENST00000554978 281 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 YWHAZP1-201ENST00000556286 722 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AC090515.3-201ENST00000560431 315 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AC009852.2-201ENST00000567898 485 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.83□□□□□ -1.48
RHBDL3P58872 AC098935.2-201ENST00000604222 466 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AC144521.1-201ENST00000607148 956 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AC013468.1-201ENST00000608680 598 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.83□□□□□ -1.48
RHBDL3P58872 MIR6853-201ENST00000619642 74 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.83□□□□□ -1.48
RHBDL3P58872 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
RHBDL3P58872 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 Z95327.2-201ENST00000414579 1873 ntBASIC5.83□□□□□ -1.48
RHBDL3P58872 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.83□□□□□ -1.48
RHBDL3P58872 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RHBDL3P58872 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RHBDL3P58872 AC022893.2-201ENST00000564832 3296 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RHBDL3P58872 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.82□□□□□ -1.48
RHBDL3P58872 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 GLULP6-201ENST00000399502 913 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.82□□□□□ -1.48
RHBDL3P58872 AC096533.1-201ENST00000411645 353 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 AC114755.2-201ENST00000413520 361 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 COX5BP7-201ENST00000414780 274 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RHBDL3P58872 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 VTI1BP4-201ENST00000427516 527 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 CEACAMP1-201ENST00000434624 1035 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.82□□□□□ -1.48
RHBDL3P58872 AL357520.1-201ENST00000441557 453 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 MTND1P33-201ENST00000446251 917 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.82□□□□□ -1.48
RHBDL3P58872 NDUFA12P1-201ENST00000455914 406 ntBASIC5.82□□□□□ -1.48
RHBDL3P58872 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
RHBDL3P58872 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms