Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LIMK1P53667 AL445189.1-201ENST00000405722 338 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 XKRYP4-201ENST00000414395 483 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AL389915.1-201ENST00000422463 466 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 RWDD4P2-201ENST00000426392 563 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.86□□□□□ -1.63
LIMK1P53667 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.86□□□□□ -1.63
LIMK1P53667 AP000949.1-201ENST00000438328 629 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.86□□□□□ -1.63
LIMK1P53667 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.86□□□□□ -1.63
LIMK1P53667 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 XKRYP5-201ENST00000449659 483 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 RN7SL189P-201ENST00000468631 289 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AC097173.1-201ENST00000505862 819 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 RNU6-1004P-201ENST00000516584 111 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AC022882.1-201ENST00000532142 501 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AC133555.2-201ENST00000550213 292 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.86□□□□□ -1.63
LIMK1P53667 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 AC092574.1-201ENST00000609771 420 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 BX005214.3-202ENST00000619809 325 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AC004232.3-201ENST00000622977 525 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 AC007342.8-201ENST00000623278 678 ntBASIC4.86□□□□□ -1.63
LIMK1P53667 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LIMK1P53667 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LIMK1P53667 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK1P53667 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LIMK1P53667 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK1P53667 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LIMK1P53667 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK1P53667 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK1P53667 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK1P53667 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.85□□□□□ -1.63
LIMK1P53667 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK1P53667 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LIMK1P53667 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK1P53667 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK1P53667 HMGB1P13-201ENST00000406019 642 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC114755.2-201ENST00000413520 361 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK1P53667 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK1P53667 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK1P53667 BX119904.1-201ENST00000432026 348 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AL035458.1-201ENST00000433096 585 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.85□□□□□ -1.63
LIMK1P53667 TDGF1P1-201ENST00000445734 527 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK1P53667 AL162591.2-201ENST00000449634 317 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 TCEA1P1-201ENST00000449716 880 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 RPS5P7-201ENST00000456664 608 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AL049829.1-201ENST00000465411 156 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC078857.1-201ENST00000469870 667 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC034236.1-201ENST00000469891 373 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC006511.1-201ENST00000470614 315 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK1P53667 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.85□□□□□ -1.63
LIMK1P53667 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK1P53667 NIFKP7-201ENST00000503365 834 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC025459.1-201ENST00000504072 156 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC025674.1-201ENST00000507074 324 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK1P53667 OR5M2P-201ENST00000529003 936 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LIMK1P53667 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK1P53667 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.85□□□□□ -1.63
LIMK1P53667 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.85□□□□□ -1.63
LIMK1P53667 RN7SL435P-201ENST00000584418 282 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 EIF1P5-201ENST00000585002 234 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK1P53667 VN1R84P-201ENST00000593697 235 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC067959.1-201ENST00000604334 379 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AC243654.2-201ENST00000612843 443 ntBASIC4.85□□□□□ -1.63
LIMK1P53667 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.85□□□□□ -1.63
LIMK1P53667 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK1P53667 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.85□□□□□ -1.63
LIMK1P53667 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.85□□□□□ -1.63
LIMK1P53667 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.85□□□□□ -1.63
LIMK1P53667 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIMK1P53667 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK1P53667 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK1P53667 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK1P53667 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK1P53667 AL445487.1-201ENST00000415694 1580 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK1P53667 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LIMK1P53667 AL590240.1-201ENST00000334118 313 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIMK1P53667 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
LIMK1P53667 RNU6-1279P-201ENST00000383917 103 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.84□□□□□ -1.63
LIMK1P53667 RPS27AP11-201ENST00000402798 447 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK1P53667 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.84□□□□□ -1.63
LIMK1P53667 AC007738.1-201ENST00000413892 348 ntBASIC4.84□□□□□ -1.63
LIMK1P53667 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms