Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.63□□□□□ -1.67
CASP4P49662 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.63□□□□□ -1.67
CASP4P49662 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.63□□□□□ -1.67
CASP4P49662 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.63□□□□□ -1.67
CASP4P49662 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.63□□□□□ -1.67
CASP4P49662 RPL23AP81-201ENST00000455252 467 ntBASIC4.63□□□□□ -1.67
CASP4P49662 AC116533.1-201ENST00000459748 321 ntBASIC4.63□□□□□ -1.67
CASP4P49662 RPL35P6-201ENST00000490024 372 ntBASIC4.63□□□□□ -1.67
CASP4P49662 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.63□□□□□ -1.67
CASP4P49662 HAUS1P1-201ENST00000505275 832 ntBASIC4.63□□□□□ -1.67
CASP4P49662 AC008958.1-201ENST00000511047 682 ntBASIC4.63□□□□□ -1.67
CASP4P49662 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.63□□□□□ -1.67
CASP4P49662 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.63□□□□□ -1.67
CASP4P49662 RNA5SP73-201ENST00000516744 108 ntBASIC4.63□□□□□ -1.67
CASP4P49662 HMGB1P19-201ENST00000517578 577 ntBASIC4.63□□□□□ -1.67
CASP4P49662 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.63□□□□□ -1.67
CASP4P49662 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.63□□□□□ -1.67
CASP4P49662 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.63□□□□□ -1.67
CASP4P49662 AC019131.2-201ENST00000609071 870 ntBASIC4.63□□□□□ -1.67
CASP4P49662 AC064801.1-201ENST00000612025 407 ntBASIC4.63□□□□□ -1.67
CASP4P49662 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.63□□□□□ -1.67
CASP4P49662 AC020763.5-201ENST00000623298 430 ntBASIC4.63□□□□□ -1.67
CASP4P49662 AC138907.10-201ENST00000623708 983 ntBASIC4.63□□□□□ -1.67
CASP4P49662 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CASP4P49662 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.62□□□□□ -1.67
CASP4P49662 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CASP4P49662 AC110792.3-201ENST00000595906 1614 ntBASIC4.62□□□□□ -1.67
CASP4P49662 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
CASP4P49662 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CASP4P49662 RNU6-1251P-201ENST00000364502 107 ntBASIC4.62□□□□□ -1.67
CASP4P49662 SNORD65-201ENST00000391079 73 ntBASIC4.62□□□□□ -1.67
CASP4P49662 EIF4A1P3-201ENST00000411521 244 ntBASIC4.62□□□□□ -1.67
CASP4P49662 AC004690.1-201ENST00000418216 328 ntBASIC4.62□□□□□ -1.67
CASP4P49662 AL358176.3-201ENST00000420757 454 ntBASIC4.62□□□□□ -1.67
CASP4P49662 GAPDHP49-201ENST00000421421 961 ntBASIC4.62□□□□□ -1.67
CASP4P49662 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.62□□□□□ -1.67
CASP4P49662 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.62□□□□□ -1.67
CASP4P49662 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.62□□□□□ -1.67
CASP4P49662 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.62□□□□□ -1.67
CASP4P49662 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.62□□□□□ -1.67
CASP4P49662 AC022431.1-201ENST00000450941 438 ntBASIC4.62□□□□□ -1.67
CASP4P49662 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.62□□□□□ -1.67
CASP4P49662 AC069277.2-201ENST00000454211 432 ntBASIC4.62□□□□□ -1.67
CASP4P49662 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CASP4P49662 RN7SL303P-201ENST00000469773 251 ntBASIC4.62□□□□□ -1.67
CASP4P49662 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CASP4P49662 AC093840.1-201ENST00000511599 336 ntBASIC4.62□□□□□ -1.67
CASP4P49662 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CASP4P49662 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.62□□□□□ -1.67
CASP4P49662 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.62□□□□□ -1.67
CASP4P49662 AC022882.1-201ENST00000532142 501 ntBASIC4.62□□□□□ -1.67
CASP4P49662 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.62□□□□□ -1.67
CASP4P49662 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.62□□□□□ -1.67
CASP4P49662 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.62□□□□□ -1.67
CASP4P49662 PSMB7P1-201ENST00000556349 514 ntBASIC4.62□□□□□ -1.67
CASP4P49662 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.62□□□□□ -1.67
CASP4P49662 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CASP4P49662 RN7SL176P-201ENST00000580352 264 ntBASIC4.62□□□□□ -1.67
CASP4P49662 SNX6P1-201ENST00000601728 1224 ntBASIC4.62□□□□□ -1.67
CASP4P49662 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.62□□□□□ -1.67
CASP4P49662 AL445423.1-201ENST00000609941 536 ntBASIC4.62□□□□□ -1.67
CASP4P49662 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.62□□□□□ -1.67
CASP4P49662 MIR6758-201ENST00000620653 63 ntBASIC4.62□□□□□ -1.67
CASP4P49662 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.62□□□□□ -1.67
CASP4P49662 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.62□□□□□ -1.67
CASP4P49662 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.62□□□□□ -1.67
CASP4P49662 HSPA8P17-201ENST00000427029 1382 ntBASIC4.62□□□□□ -1.67
CASP4P49662 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CASP4P49662 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.62□□□□□ -1.67
CASP4P49662 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.62□□□□□ -1.67
CASP4P49662 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.62□□□□□ -1.67
CASP4P49662 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.61□□□□□ -1.67
CASP4P49662 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CASP4P49662 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.61□□□□□ -1.67
CASP4P49662 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CASP4P49662 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CASP4P49662 OR4K17-201ENST00000315543 1032 ntBASIC4.61□□□□□ -1.67
CASP4P49662 OR52B1P-201ENST00000316506 909 ntBASIC4.61□□□□□ -1.67
CASP4P49662 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CASP4P49662 RNU4-23P-201ENST00000362839 140 ntBASIC4.61□□□□□ -1.67
CASP4P49662 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CASP4P49662 AC019155.1-201ENST00000382242 574 ntBASIC4.61□□□□□ -1.67
CASP4P49662 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.61□□□□□ -1.67
CASP4P49662 MTCYBP7-201ENST00000419540 1134 ntBASIC4.61□□□□□ -1.67
CASP4P49662 RBMY1KP-201ENST00000423480 476 ntBASIC4.61□□□□□ -1.67
CASP4P49662 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.61□□□□□ -1.67
CASP4P49662 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CASP4P49662 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.61□□□□□ -1.67
CASP4P49662 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CASP4P49662 AL132765.1-201ENST00000434165 553 ntBASIC4.61□□□□□ -1.67
CASP4P49662 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.61□□□□□ -1.67
CASP4P49662 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CASP4P49662 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.61□□□□□ -1.67
CASP4P49662 BUD31P2-201ENST00000449374 300 ntBASIC4.61□□□□□ -1.67
CASP4P49662 RPS29P19-201ENST00000479709 171 ntBASIC4.61□□□□□ -1.67
CASP4P49662 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.61□□□□□ -1.67
CASP4P49662 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.61□□□□□ -1.67
CASP4P49662 BNIP3P41-201ENST00000503774 571 ntBASIC4.61□□□□□ -1.67
CASP4P49662 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.61□□□□□ -1.67
CASP4P49662 OR8X1P-201ENST00000534542 869 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms