Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM1P09493 AL021997.2-201ENST00000615674 271 ntBASIC4.7□□□□□ -1.66
TPM1P09493 AL645927.2-201ENST00000618350 349 ntBASIC4.7□□□□□ -1.66
TPM1P09493 AC105105.5-201ENST00000622635 1294 ntBASIC4.7□□□□□ -1.66
TPM1P09493 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.7□□□□□ -1.66
TPM1P09493 MIR6715B-201ENST00000637172 77 ntBASIC4.7□□□□□ -1.66
TPM1P09493 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM1P09493 AC007342.7-201ENST00000624610 2337 ntBASIC4.7□□□□□ -1.66
TPM1P09493 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.7□□□□□ -1.66
TPM1P09493 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TPM1P09493 MTCO1P11-201ENST00000429111 1528 ntBASIC4.7□□□□□ -1.66
TPM1P09493 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TPM1P09493 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
TPM1P09493 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.69□□□□□ -1.66
TPM1P09493 FAM35DP-201ENST00000323387 2712 ntBASIC4.69□□□□□ -1.66
TPM1P09493 FAM3C2-201ENST00000312214 681 ntBASIC4.69□□□□□ -1.66
TPM1P09493 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TPM1P09493 RNA5SP322-201ENST00000363617 119 ntBASIC4.69□□□□□ -1.66
TPM1P09493 MT-TP-201ENST00000387461 68 ntBASIC4.69□□□□□ -1.66
TPM1P09493 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.69□□□□□ -1.66
TPM1P09493 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.69□□□□□ -1.66
TPM1P09493 RPL12P28-201ENST00000430852 489 ntBASIC4.69□□□□□ -1.66
TPM1P09493 RPS6P12-201ENST00000432491 726 ntBASIC4.69□□□□□ -1.66
TPM1P09493 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.69□□□□□ -1.66
TPM1P09493 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.69□□□□□ -1.66
TPM1P09493 PPIAP17-201ENST00000438507 471 ntBASIC4.69□□□□□ -1.66
TPM1P09493 AC073648.4-201ENST00000442655 781 ntBASIC4.69□□□□□ -1.66
TPM1P09493 RAD23BP3-201ENST00000454157 1152 ntBASIC4.69□□□□□ -1.66
TPM1P09493 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.69□□□□□ -1.66
TPM1P09493 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.69□□□□□ -1.66
TPM1P09493 MIR2114-201ENST00000516645 80 ntBASIC4.69□□□□□ -1.66
TPM1P09493 RNU6-347P-201ENST00000516658 105 ntBASIC4.69□□□□□ -1.66
TPM1P09493 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.69□□□□□ -1.66
TPM1P09493 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.69□□□□□ -1.66
TPM1P09493 AP000827.1-201ENST00000527814 258 ntBASIC4.69□□□□□ -1.66
TPM1P09493 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TPM1P09493 AC006064.5-201ENST00000541782 248 ntBASIC4.69□□□□□ -1.66
TPM1P09493 AC135001.1-201ENST00000544546 283 ntBASIC4.69□□□□□ -1.66
TPM1P09493 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.69□□□□□ -1.66
TPM1P09493 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.69□□□□□ -1.66
TPM1P09493 AC079587.1-201ENST00000603846 277 ntBASIC4.69□□□□□ -1.66
TPM1P09493 AC007620.3-201ENST00000608131 497 ntBASIC4.69□□□□□ -1.66
TPM1P09493 AP005019.3-201ENST00000620418 560 ntBASIC4.69□□□□□ -1.66
TPM1P09493 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.69□□□□□ -1.66
TPM1P09493 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TPM1P09493 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TPM1P09493 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TPM1P09493 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
TPM1P09493 ZNF962P-201ENST00000443465 3140 ntBASIC4.69□□□□□ -1.66
TPM1P09493 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TPM1P09493 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.69□□□□□ -1.66
TPM1P09493 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
TPM1P09493 PNPT1P2-201ENST00000456768 2050 ntBASIC4.68□□□□□ -1.66
TPM1P09493 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
TPM1P09493 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TPM1P09493 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TPM1P09493 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TPM1P09493 MIR659-201ENST00000384963 97 ntBASIC4.68□□□□□ -1.66
TPM1P09493 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.68□□□□□ -1.66
TPM1P09493 SNORA11.5-201ENST00000408163 128 ntBASIC4.68□□□□□ -1.66
TPM1P09493 SNORA3C-201ENST00000408792 125 ntBASIC4.68□□□□□ -1.66
TPM1P09493 RN7SKP106-201ENST00000410832 272 ntBASIC4.68□□□□□ -1.66
TPM1P09493 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TPM1P09493 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TPM1P09493 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TPM1P09493 OR6K4P-201ENST00000423179 955 ntBASIC4.68□□□□□ -1.66
TPM1P09493 RWDD4P2-201ENST00000426392 563 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.68□□□□□ -1.66
TPM1P09493 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.68□□□□□ -1.66
TPM1P09493 AL356535.1-201ENST00000440335 398 ntBASIC4.68□□□□□ -1.66
TPM1P09493 TPTE2P3-201ENST00000441562 1189 ntBASIC4.68□□□□□ -1.66
TPM1P09493 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TPM1P09493 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.68□□□□□ -1.66
TPM1P09493 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.68□□□□□ -1.66
TPM1P09493 RPL31P44-201ENST00000447680 377 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.68□□□□□ -1.66
TPM1P09493 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.68□□□□□ -1.66
TPM1P09493 RWDD4P1-201ENST00000488019 565 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AC104164.2-201ENST00000496953 495 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AC109458.1-201ENST00000508858 316 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AC110775.1-201ENST00000513721 462 ntBASIC4.68□□□□□ -1.66
TPM1P09493 SNORD116-26-201ENST00000516006 96 ntBASIC4.68□□□□□ -1.66
TPM1P09493 IGKV1-32-201ENST00000519290 311 ntBASIC4.68□□□□□ -1.66
TPM1P09493 OR5M2P-201ENST00000529003 936 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AP000676.2-201ENST00000529711 301 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AP001781.1-201ENST00000530977 207 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.68□□□□□ -1.66
TPM1P09493 AL109766.1-201ENST00000555080 552 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.68□□□□□ -1.66
TPM1P09493 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.68□□□□□ -1.66
TPM1P09493 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.68□□□□□ -1.66
TPM1P09493 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.68□□□□□ -1.66
TPM1P09493 AC025175.1-201ENST00000606482 759 ntBASIC4.68□□□□□ -1.66
TPM1P09493 AC008725.1-201ENST00000605123 2263 ntBASIC4.68□□□□□ -1.66
TPM1P09493 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TPM1P09493 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
TPM1P09493 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TPM1P09493 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.68□□□□□ -1.66
TPM1P09493 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TPM1P09493 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms