Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 CDR1-202ENST00000625883 1485 ntBASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDHGA3Q9Y5H0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC009962.1-201ENST00000567327 3813 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 EI24P3-201ENST00000399046 1062 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 RPL23AP47-201ENST00000408017 460 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 MIR1286-201ENST00000408112 78 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 RNU4-34P-201ENST00000410431 124 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 RPS15AP38-201ENST00000413110 372 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 CFL1P1-202ENST00000432948 411 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 CLUHP1-201ENST00000435012 1190 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 OR52E3P-201ENST00000452083 936 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC092754.2-201ENST00000463506 460 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 RPL30P6-201ENST00000475925 342 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 RN7SL570P-201ENST00000484405 292 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 RN7SKP31-201ENST00000516354 278 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC021678.3-201ENST00000517893 476 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 ARL2BPP5-201ENST00000523141 481 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 OR8Q1P-201ENST00000526467 655 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC135628.1-201ENST00000568867 534 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC063977.5-201ENST00000601044 974 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC095055.1-201ENST00000603472 1113 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AL354760.1-201ENST00000608357 643 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC011939.3-201ENST00000613686 466 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC123768.4-201ENST00000616244 701 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AL136981.2-201ENST00000617319 734 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC018445.2-201ENST00000622987 260 ntBASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PCDHGA3Q9Y5H0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC235565.1-201ENST00000456962 1325 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 PHKBP1-201ENST00000450951 1951 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC021755.1-201ENST00000559747 1447 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AL590763.1-201ENST00000398297 1545 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 ELL2P3-201ENST00000457883 1602 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 U3.7-201ENST00000363668 216 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AL022400.1-201ENST00000423946 935 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 RPL37P1-201ENST00000432310 284 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC012075.1-201ENST00000436549 580 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 MTND2P40-201ENST00000436718 841 ntBASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA3Q9Y5H0 AC097262.1-201ENST00000452559 548 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms