Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC090017.1-201ENST00000548612 1779 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 AC093311.1-201ENST00000506586 2021 ntBASIC4.04□□□□□ -1.76
VAPAQ9P0L0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AL133412.1-201ENST00000380194 2992 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AL583835.1-201ENST00000399570 407 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AP000357.1-201ENST00000409926 1165 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 RAC1P3-201ENST00000416129 580 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 NDUFA5P1-201ENST00000433858 341 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 CEACAMP1-201ENST00000434624 1035 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 VN1R54P-201ENST00000435210 1049 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 FTH1P16-201ENST00000435241 552 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 RPL12P46-201ENST00000436610 195 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 PTMAP6-201ENST00000439110 327 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AL162591.2-201ENST00000449634 317 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 RPL21P126-201ENST00000470049 478 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 BNIP3P41-201ENST00000503774 571 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AC018797.3-201ENST00000513388 1241 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 RNU6-319P-201ENST00000516025 108 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AC068790.7-201ENST00000602347 528 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AC008782.1-201ENST00000603386 430 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AC115286.1-201ENST00000604298 434 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 AC008013.2-202ENST00000637965 364 ntBASIC4.03□□□□□ -1.76
VAPAQ9P0L0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VAPAQ9P0L0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.77
VAPAQ9P0L0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 MIR331-201ENST00000362302 94 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 SNORA37-201ENST00000384504 129 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 RNU6-603P-201ENST00000411403 107 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 TMSB10P2-201ENST00000416049 131 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 EIF1P3-201ENST00000423841 334 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 RWDD4P2-201ENST00000426392 563 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AL132765.1-201ENST00000434165 553 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AC073648.4-201ENST00000442655 781 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AL451050.1-201ENST00000450126 415 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 RN7SL329P-201ENST00000467740 299 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 SEPT7P6-201ENST00000469999 1143 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AC117394.1-201ENST00000477323 567 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 RWDD4P1-201ENST00000488019 565 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 RMST_5.1-201ENST00000618704 126 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AC233309.1-201ENST00000619522 751 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AC074276.2-201ENST00000619891 348 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 AL356489.2-201ENST00000566968 3528 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 A2MP1-204ENST00000566278 4130 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 RARSP1-201ENST00000542842 1418 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 RAD17P1-201ENST00000418130 2042 ntBASIC4.02□□□□□ -1.77
VAPAQ9P0L0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VAPAQ9P0L0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VAPAQ9P0L0 RNA5SP513-201ENST00000364648 118 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms