Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AL596275.2-206ENST00000641957 626 ntBASIC4.37□□□□□ -1.71
CISHQ9NSE2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CISHQ9NSE2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CISHQ9NSE2 AC083843.3-201ENST00000623679 2186 ntBASIC4.37□□□□□ -1.71
CISHQ9NSE2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CISHQ9NSE2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CISHQ9NSE2 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CISHQ9NSE2 Z82217.1-201ENST00000625157 8149 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 USP9YP4-201ENST00000424401 1745 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CISHQ9NSE2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 ENSAP1-201ENST00000392855 326 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 RPS26P8-201ENST00000393490 348 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 HSPE1P12-201ENST00000412576 301 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 TPT1P2-201ENST00000413105 503 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 RSL24D1P6-201ENST00000426934 401 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 RFPL4AP5-201ENST00000514977 504 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 AC134698.5-201ENST00000519444 336 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 NPM1P6-201ENST00000521088 871 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 AL358913.1-201ENST00000554342 121 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 AC010547.7-201ENST00000570323 333 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 DPRXP4-201ENST00000578053 568 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 AL591034.3-201ENST00000605511 685 ntBASIC4.36□□□□□ -1.71
CISHQ9NSE2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CISHQ9NSE2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CISHQ9NSE2 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CISHQ9NSE2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.36□□□□□ -1.71
CISHQ9NSE2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CISHQ9NSE2 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CISHQ9NSE2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CISHQ9NSE2 SNORA60-201ENST00000362396 134 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 SNORD35B-201ENST00000363660 87 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 RNA5SP130-201ENST00000364431 114 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 SNORA70.2-201ENST00000364506 135 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 MIR137-201ENST00000385223 102 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 AL022722.2-201ENST00000402519 180 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 EIF4A1P3-201ENST00000411521 244 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CISHQ9NSE2 RN7SL385P-201ENST00000468873 276 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 AC069240.1-201ENST00000548774 375 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 AC025627.2-201ENST00000576220 160 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 AL451044.1-201ENST00000604867 238 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 AC023043.4-201ENST00000612081 449 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 AC095038.2-201ENST00000621464 1070 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 CDY3P-201ENST00000454543 1618 ntBASIC4.35□□□□□ -1.71
CISHQ9NSE2 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.35□□□□□ -1.71
CISHQ9NSE2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CISHQ9NSE2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 MIR513A2-201ENST00000385249 127 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 RNA5SP317-201ENST00000410176 116 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 RNA5SP311-201ENST00000411290 116 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 AL356095.1-201ENST00000417217 199 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CISHQ9NSE2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 AC002553.2-201ENST00000453217 340 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 AC092691.2-201ENST00000461787 803 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 RPS7P7-201ENST00000463499 571 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.34□□□□□ -1.71
CISHQ9NSE2 RNA5SP315-201ENST00000516340 116 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 RNA5SP312-201ENST00000517068 116 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 IGKV2-38-201ENST00000517443 247 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 IGKV2D-10-201ENST00000520194 281 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 UBTFL9-201ENST00000534504 1148 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 PARP1P2-201ENST00000556806 195 ntBASIC4.34□□□□□ -1.71
CISHQ9NSE2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CISHQ9NSE2 MIR6867-201ENST00000610636 67 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms