Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 BTF3P8-201ENST00000414577 526 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC246680.2-201ENST00000422106 389 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AL365338.1-201ENST00000422282 858 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 RPL35AP21-201ENST00000437667 333 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 RPL34P26-201ENST00000445636 354 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 Z99714.1-201ENST00000450463 807 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC091685.2-201ENST00000454924 864 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 SEPT7P3-201ENST00000455017 621 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 RPL7P32-201ENST00000457119 744 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC073073.1-201ENST00000493920 463 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC105031.1-201ENST00000518550 476 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 DEFB130C-202ENST00000530001 230 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC007834.2-201ENST00000536310 343 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 OSBPL9P5-201ENST00000542581 171 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC233702.9-201ENST00000581528 203 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC021171.1-201ENST00000603137 706 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 MTND3P19-201ENST00000603825 345 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 MIR6820-201ENST00000611508 62 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC091304.6-201ENST00000619761 202 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AP002782.1-201ENST00000623107 614 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AL121594.5-201ENST00000631724 573 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AP003399.1-201ENST00000637534 361 ntBASIC5.22□□□□□ -1.57
USP29Q9HBJ7 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
USP29Q9HBJ7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.21□□□□□ -1.57
USP29Q9HBJ7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
USP29Q9HBJ7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.21□□□□□ -1.57
USP29Q9HBJ7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
USP29Q9HBJ7 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.21□□□□□ -1.57
USP29Q9HBJ7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
USP29Q9HBJ7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
USP29Q9HBJ7 ZNF876P-202ENST00000398732 1485 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 RN7SKP115-201ENST00000363177 317 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 LRRC37BP1-201ENST00000398851 714 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL136131.1-201ENST00000406079 803 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 HMGB3P18-201ENST00000406327 590 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL450023.3-201ENST00000440592 271 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 EEF1A1P39-201ENST00000440791 250 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 MTCYBP42-201ENST00000444653 1130 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 HMGB3P6-201ENST00000444896 598 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC004980.3-201ENST00000447046 365 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 OR6K5P-201ENST00000447050 945 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL035407.2-201ENST00000454090 378 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 RPL35AP28-201ENST00000459730 331 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 RN7SL443P-201ENST00000464331 290 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 RN7SL346P-201ENST00000491561 294 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC023050.1-201ENST00000498198 304 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 HPRT1P2-201ENST00000505250 544 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 RPL23AP53-201ENST00000521854 457 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 EDDM3DP-201ENST00000554692 434 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 MTCYBP27-201ENST00000555160 670 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 SETP1-201ENST00000556014 845 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 NDUFB4P11-201ENST00000560510 395 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC040904.1-201ENST00000590850 223 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC091057.2-201ENST00000602594 792 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL451064.1-201ENST00000607718 471 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC009237.15-201ENST00000610252 501 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC017037.3-201ENST00000625016 472 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AL353662.3-201ENST00000625131 237 ntBASIC5.21□□□□□ -1.58
USP29Q9HBJ7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms