Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC092017.2-201ENST00000427600 362 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 DNAJC19P7-201ENST00000428811 344 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC007563.3-201ENST00000433233 371 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 GSTA7P-201ENST00000438425 448 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 Z73417.1-201ENST00000447373 778 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 BTF3P6-201ENST00000448054 499 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 BUD31P2-201ENST00000449374 300 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC010733.1-201ENST00000451515 401 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC234781.3-201ENST00000452540 973 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 HMGB1P38-201ENST00000490557 577 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 HMGB3P16-201ENST00000508037 287 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 BTG4P1-201ENST00000510421 183 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AGGF1P9-201ENST00000561884 913 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 DPRXP4-201ENST00000578053 568 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AP001094.1-201ENST00000579805 193 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC021851.1-201ENST00000608537 1082 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC015914.2-201ENST00000618167 288 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC091304.6-201ENST00000619761 202 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AP000648.2-201ENST00000624182 404 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AP003497.2-201ENST00000624220 967 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 AC096656.1-201ENST00000623826 1364 ntBASIC5.11□□□□□ -1.59
EBF3Q9H4W6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.11□□□□□ -1.59
EBF3Q9H4W6 MIR16-2-201ENST00000362117 81 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AL035079.1-201ENST00000405210 287 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC096533.1-201ENST00000411645 353 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 RPL36AP10-201ENST00000421785 322 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 MTND1P20-201ENST00000430341 950 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC016712.1-201ENST00000431088 378 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC010153.1-201ENST00000432862 727 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 MUPP-201ENST00000438111 566 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 SLC25A18P1-201ENST00000449385 454 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AURKAPS2-201ENST00000454983 333 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 RPL23AP56-201ENST00000460778 453 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC008379.1-201ENST00000463655 464 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC004263.1-201ENST00000479327 332 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC011005.3-201ENST00000491624 395 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC112518.2-201ENST00000508565 425 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 RNU6-311P-201ENST00000516224 102 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 RN7SKP276-201ENST00000516242 268 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 MRPS36P3-201ENST00000519284 130 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC010376.1-201ENST00000522101 334 ntBASIC5.1□□□□□ -1.59
EBF3Q9H4W6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.1□□□□□ -1.59
EBF3Q9H4W6 AC009097.3-201ENST00000563557 1018 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms