Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 SNORA11F-201ENST00000408237 128 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 NFYAP1-201ENST00000431953 972 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 snoU13.22-201ENST00000459428 104 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 RN7SL812P-201ENST00000493791 279 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 AP002812.1-201ENST00000495378 474 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 NDUFB4P12-201ENST00000513465 390 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 IFITM8P-201ENST00000522529 394 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 AL137072.1-201ENST00000603444 466 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 SNX18P1Y-201ENST00000616231 511 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 LINC00901.1-201ENST00000617252 152 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 ZYXP1-201ENST00000617638 118 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 AL445363.3-201ENST00000623080 671 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 AC008013.2-202ENST00000637965 364 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 MTND5P23-201ENST00000430812 1655 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 RN7SKP224-201ENST00000364140 325 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 RNA5SP175-201ENST00000364275 119 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 MIR513A2-201ENST00000385249 127 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AL356968.2-201ENST00000412769 1257 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 RPL36AP36-201ENST00000418616 301 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AC020593.1-201ENST00000507399 299 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 DYNLL1P4-201ENST00000549314 266 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AC068831.4-201ENST00000556118 109 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AC005332.5-201ENST00000591222 2919 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AL606537.1-201ENST00000607258 2011 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 AL121890.3-201ENST00000618494 516 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 ZNF962P-201ENST00000443465 3140 ntBASIC5.1□□□□□ -1.59
UPF3BQ9BZI7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 SEPT7P2-202ENST00000398921 823 ntBASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 NRBF2P2-201ENST00000413087 861 ntBASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 SNRPFP2-201ENST00000440710 251 ntBASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 EEF1A1P1-201ENST00000447052 739 ntBASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 OR9N1P-201ENST00000491296 333 ntBASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 AF186190.1-201ENST00000517470 480 ntBASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 AC006064.5-201ENST00000541782 248 ntBASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 AC064801.1-201ENST00000612025 407 ntBASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 AC138907.10-201ENST00000623708 983 ntBASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPF3BQ9BZI7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.09□□□□□ -1.6
UPF3BQ9BZI7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
UPF3BQ9BZI7 AC093775.1-201ENST00000624154 1868 ntBASIC5.09□□□□□ -1.6
UPF3BQ9BZI7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 OR4K17-201ENST00000315543 1032 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 OR52B1P-201ENST00000316506 909 ntBASIC5.08□□□□□ -1.6
UPF3BQ9BZI7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms