Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU6-1279P-201ENST00000383917 103 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 RBMY1KP-201ENST00000423480 476 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 CNOT7P1-201ENST00000429006 852 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 RPS6P12-201ENST00000432491 726 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 RPL12P46-201ENST00000436610 195 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC010469.1-201ENST00000463864 576 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 RN7SL810P-201ENST00000493031 276 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AP000926.3-201ENST00000497201 299 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC010374.1-201ENST00000503762 1237 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC084033.1-201ENST00000550830 633 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AL121839.1-201ENST00000556233 1185 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC65Q8IXS2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC093311.1-201ENST00000506586 2021 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC011266.1-201ENST00000624119 3569 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 SNORD66.1-201ENST00000391230 76 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 MIR937-201ENST00000401271 86 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 RPS23P10-201ENST00000416185 486 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 PRELID3BP10-201ENST00000431957 584 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 CEACAMP1-201ENST00000434624 1035 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 IFNWP4-201ENST00000453148 294 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 RPS29P33-201ENST00000456717 146 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 RPL7P32-201ENST00000457119 744 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 snoU13.1-201ENST00000459157 104 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 RN7SL98P-201ENST00000462271 300 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC018797.3-201ENST00000513388 1241 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 IGLV3-26-201ENST00000520756 302 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AL121834.1-201ENST00000572284 509 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC005191.1-201ENST00000603950 358 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC078899.5-201ENST00000612475 178 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AL121873.1-201ENST00000616013 524 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC007546.1-201ENST00000619452 559 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 RMST_9.1-201ENST00000619945 193 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 MIR7154-201ENST00000620673 73 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AP006248.2-201ENST00000623309 592 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AC140479.6-201ENST00000633535 357 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 AL049555.1-201ENST00000562834 1933 ntBASIC4.8□□□□□ -1.64
CCDC65Q8IXS2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 RPL37P18-201ENST00000411602 243 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC098592.2-201ENST00000413158 265 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AL450992.3-201ENST00000413192 568 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 RPS27AP7-201ENST00000422792 455 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC245028.1-201ENST00000423259 256 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 OR6C72P-201ENST00000451403 892 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 Z95152.1-201ENST00000453556 656 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 RPS27AP16-201ENST00000492222 470 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 OR8G5-201ENST00000524943 1041 ntBASIC4.79□□□□□ -1.64
CCDC65Q8IXS2 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms