Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC71Q8IV32 AL121950.1-201ENST00000624993 2077 ntBASIC4.34□□□□□ -1.71
CCDC71Q8IV32 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
CCDC71Q8IV32 AC007342.7-201ENST00000624610 2337 ntBASIC4.34□□□□□ -1.72
CCDC71Q8IV32 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC71Q8IV32 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC71Q8IV32 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC71Q8IV32 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 NCLP2-201ENST00000416078 1462 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 RNA5SP151-201ENST00000365632 117 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 EIF4A1P3-201ENST00000411521 244 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 RPL26P37-201ENST00000411983 438 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 RSU1P3-201ENST00000412878 835 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 BX510359.2-201ENST00000417920 305 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC006065.1-201ENST00000422539 802 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC073508.1-201ENST00000428866 656 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AL359265.2-201ENST00000434367 631 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 CYCSP53-201ENST00000455540 265 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC092691.2-201ENST00000461787 803 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AL672167.3-201ENST00000465951 960 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC107015.1-201ENST00000466902 747 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC026979.1-201ENST00000492525 396 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AK3P4-201ENST00000504283 583 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 MTCO1P31-201ENST00000506355 492 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 STMN1P2-201ENST00000508435 439 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC103833.1-201ENST00000517442 172 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC109635.6-201ENST00000525487 1113 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 GLRXP2-201ENST00000555594 321 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 MIR5096-201ENST00000583713 70 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC092574.1-201ENST00000609771 420 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC019193.2-201ENST00000610012 634 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 FAM27B-201ENST00000610601 213 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AL512506.1-201ENST00000613918 449 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AL353726.1-201ENST00000614041 1000 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AC009237.17-201ENST00000618111 748 ntBASIC4.33□□□□□ -1.72
CCDC71Q8IV32 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC71Q8IV32 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AL133243.3-201ENST00000617415 3004 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AL132640.2-201ENST00000559968 1698 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 RLIMP2-201ENST00000427891 1563 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC104297.1-201ENST00000393779 870 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 RPS3AP23-201ENST00000401762 784 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AL121834.1-202ENST00000404494 277 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 VDAC1P9-201ENST00000412766 841 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 RPS17P8-201ENST00000434525 335 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AL513321.1-201ENST00000441175 761 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 ARL2BPP10-201ENST00000446487 531 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AL157827.1-201ENST00000447622 132 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 CEACAMP6-201ENST00000452007 574 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 RPL5P30-201ENST00000465511 891 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC71Q8IV32 IGLV3-26-201ENST00000520756 302 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 AC018442.3-201ENST00000523025 183 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 OR5M2P-201ENST00000529003 936 ntBASIC4.32□□□□□ -1.72
CCDC71Q8IV32 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms