Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH6P55285 AC011155.1-201ENST00000316512 456 ntBASIC4.48□□□□□ -1.69
CDH6P55285 MIR708-201ENST00000390708 88 ntBASIC4.48□□□□□ -1.69
CDH6P55285 SNORD65-201ENST00000391079 73 ntBASIC4.48□□□□□ -1.69
CDH6P55285 AC093719.1-202ENST00000392735 373 ntBASIC4.48□□□□□ -1.69
CDH6P55285 SNORA11F-201ENST00000408237 128 ntBASIC4.48□□□□□ -1.69
CDH6P55285 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH6P55285 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH6P55285 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH6P55285 CYCSP10-201ENST00000417973 294 ntBASIC4.48□□□□□ -1.69
CDH6P55285 CEACAMP1-201ENST00000434624 1035 ntBASIC4.48□□□□□ -1.69
CDH6P55285 RPS20P1-201ENST00000434853 354 ntBASIC4.48□□□□□ -1.69
CDH6P55285 PHBP16-201ENST00000446318 950 ntBASIC4.48□□□□□ -1.69
CDH6P55285 FCF1P7-201ENST00000451185 558 ntBASIC4.48□□□□□ -1.69
CDH6P55285 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH6P55285 Z95152.1-201ENST00000453556 656 ntBASIC4.48□□□□□ -1.69
CDH6P55285 C1DP3-201ENST00000455013 423 ntBASIC4.48□□□□□ -1.69
CDH6P55285 snoU13.1-201ENST00000459157 104 ntBASIC4.48□□□□□ -1.69
CDH6P55285 RPS27AP16-201ENST00000492222 470 ntBASIC4.48□□□□□ -1.69
CDH6P55285 RN7SL810P-201ENST00000493031 276 ntBASIC4.48□□□□□ -1.69
CDH6P55285 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH6P55285 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH6P55285 IGHV3-63-201ENST00000518422 341 ntBASIC4.48□□□□□ -1.69
CDH6P55285 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH6P55285 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH6P55285 AL049874.4-201ENST00000557593 255 ntBASIC4.48□□□□□ -1.69
CDH6P55285 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH6P55285 AC113403.1-201ENST00000604910 193 ntBASIC4.48□□□□□ -1.69
CDH6P55285 AC025175.1-201ENST00000606482 759 ntBASIC4.48□□□□□ -1.69
CDH6P55285 AC090948.1-201ENST00000607464 549 ntBASIC4.48□□□□□ -1.69
CDH6P55285 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.48□□□□□ -1.69
CDH6P55285 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.48□□□□□ -1.69
CDH6P55285 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH6P55285 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH6P55285 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CDH6P55285 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH6P55285 AC010329.2-201ENST00000595195 2737 ntBASIC4.48□□□□□ -1.69
CDH6P55285 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH6P55285 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH6P55285 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH6P55285 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH6P55285 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.48□□□□□ -1.69
CDH6P55285 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH6P55285 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CDH6P55285 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CDH6P55285 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDH6P55285 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 RNU1-108P-201ENST00000362556 161 ntBASIC4.47□□□□□ -1.69
CDH6P55285 RNA5SP28-201ENST00000363841 119 ntBASIC4.47□□□□□ -1.69
CDH6P55285 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDH6P55285 AL583835.1-201ENST00000399570 407 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AL139039.2-201ENST00000407436 479 ntBASIC4.47□□□□□ -1.69
CDH6P55285 ELOCP19-201ENST00000411919 318 ntBASIC4.47□□□□□ -1.69
CDH6P55285 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 AL161631.1-201ENST00000417933 486 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH6P55285 AC099336.2-201ENST00000422457 254 ntBASIC4.47□□□□□ -1.69
CDH6P55285 RBMY1KP-201ENST00000423480 476 ntBASIC4.47□□□□□ -1.69
CDH6P55285 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 EIF1P3-201ENST00000423841 334 ntBASIC4.47□□□□□ -1.69
CDH6P55285 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.47□□□□□ -1.69
CDH6P55285 RPL23AP52-201ENST00000439311 478 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 RPL31P20-201ENST00000449593 360 ntBASIC4.47□□□□□ -1.69
CDH6P55285 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AC099560.2-201ENST00000457554 255 ntBASIC4.47□□□□□ -1.69
CDH6P55285 HMGN1P8-201ENST00000463578 288 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 STRADBP1-201ENST00000478954 1281 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AC108145.1-201ENST00000503770 153 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH6P55285 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
CDH6P55285 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.47□□□□□ -1.69
CDH6P55285 OR8G5-201ENST00000524943 1041 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH6P55285 AL109766.1-201ENST00000555080 552 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.47□□□□□ -1.69
CDH6P55285 MIR5096-201ENST00000583713 70 ntBASIC4.47□□□□□ -1.69
CDH6P55285 AC084373.1-201ENST00000603311 235 ntBASIC4.47□□□□□ -1.69
CDH6P55285 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH6P55285 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
CDH6P55285 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.47□□□□□ -1.69
CDH6P55285 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDH6P55285 AC092079.1-201ENST00000558620 1985 ntBASIC4.47□□□□□ -1.69
CDH6P55285 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CDH6P55285 AC105074.1-201ENST00000623380 3095 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms