Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLTCL1P53675 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLTCL1P53675 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLTCL1P53675 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLTCL1P53675 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLTCL1P53675 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.79□□□□□ -1.48
CLTCL1P53675 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.79□□□□□ -1.48
CLTCL1P53675 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.78□□□□□ -1.48
CLTCL1P53675 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLTCL1P53675 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.78□□□□□ -1.48
CLTCL1P53675 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.78□□□□□ -1.48
CLTCL1P53675 RBMY1KP-201ENST00000423480 476 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.78□□□□□ -1.48
CLTCL1P53675 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.78□□□□□ -1.48
CLTCL1P53675 AC104306.1-201ENST00000449702 371 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.78□□□□□ -1.48
CLTCL1P53675 AC007688.1-201ENST00000475592 759 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 ARL4AP1-201ENST00000503220 705 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.78□□□□□ -1.48
CLTCL1P53675 MTND1P6-201ENST00000523621 946 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLTCL1P53675 RPL21P7-201ENST00000557463 483 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 AC022968.1-201ENST00000567372 442 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 AC015726.1-201ENST00000602353 681 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 AC067931.1-201ENST00000624190 671 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 AL356121.2-201ENST00000624715 780 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 AF001550.2-201ENST00000636643 217 ntBASIC5.78□□□□□ -1.48
CLTCL1P53675 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.78□□□□□ -1.48
CLTCL1P53675 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.78□□□□□ -1.48
CLTCL1P53675 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLTCL1P53675 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLTCL1P53675 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLTCL1P53675 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CLTCL1P53675 RAB9AP3-201ENST00000412737 573 ntBASIC5.77□□□□□ -1.48
CLTCL1P53675 AC073335.1-201ENST00000427776 363 ntBASIC5.77□□□□□ -1.48
CLTCL1P53675 RAB9AP1-201ENST00000449393 573 ntBASIC5.77□□□□□ -1.48
CLTCL1P53675 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.77□□□□□ -1.48
CLTCL1P53675 PRSS3P4-201ENST00000453323 162 ntBASIC5.77□□□□□ -1.48
CLTCL1P53675 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CLTCL1P53675 RN7SKP141-201ENST00000516167 338 ntBASIC5.77□□□□□ -1.48
CLTCL1P53675 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.77□□□□□ -1.48
CLTCL1P53675 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.77□□□□□ -1.48
CLTCL1P53675 AP005264.7-201ENST00000625003 745 ntBASIC5.77□□□□□ -1.48
CLTCL1P53675 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.77□□□□□ -1.48
CLTCL1P53675 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLTCL1P53675 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CLTCL1P53675 AC006484.1-201ENST00000435086 1884 ntBASIC5.77□□□□□ -1.49
CLTCL1P53675 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLTCL1P53675 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.77□□□□□ -1.49
CLTCL1P53675 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLTCL1P53675 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLTCL1P53675 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CLTCL1P53675 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.77□□□□□ -1.49
CLTCL1P53675 RNA5SP119-201ENST00000362715 117 ntBASIC5.77□□□□□ -1.49
CLTCL1P53675 PGBD4P8-201ENST00000412993 562 ntBASIC5.77□□□□□ -1.49
CLTCL1P53675 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.77□□□□□ -1.49
CLTCL1P53675 AL139247.1-201ENST00000422768 325 ntBASIC5.77□□□□□ -1.49
CLTCL1P53675 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.77□□□□□ -1.49
CLTCL1P53675 RN7SL323P-201ENST00000494712 295 ntBASIC5.77□□□□□ -1.49
CLTCL1P53675 IGLV3-26-201ENST00000520756 302 ntBASIC5.77□□□□□ -1.49
CLTCL1P53675 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.77□□□□□ -1.49
CLTCL1P53675 AC093591.2-201ENST00000565254 3843 ntBASIC5.77□□□□□ -1.49
CLTCL1P53675 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.77□□□□□ -1.49
CLTCL1P53675 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.77□□□□□ -1.49
CLTCL1P53675 ZNF285B-201ENST00000561698 1767 ntBASIC5.77□□□□□ -1.49
CLTCL1P53675 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLTCL1P53675 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.76□□□□□ -1.49
CLTCL1P53675 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CLTCL1P53675 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLTCL1P53675 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.76□□□□□ -1.49
CLTCL1P53675 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.76□□□□□ -1.49
CLTCL1P53675 AC006971.1-201ENST00000407916 4486 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CLTCL1P53675 MIR449B-201ENST00000384995 97 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLTCL1P53675 VN1R8P-201ENST00000407739 893 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 AC009237.5-201ENST00000414271 501 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.76□□□□□ -1.49
CLTCL1P53675 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.76□□□□□ -1.49
CLTCL1P53675 ACTR3P3-201ENST00000480448 893 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 AC006517.1-201ENST00000480485 328 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 AC012158.1-204ENST00000483430 465 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 AL139099.1-201ENST00000497398 403 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.76□□□□□ -1.49
CLTCL1P53675 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.76□□□□□ -1.49
CLTCL1P53675 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.76□□□□□ -1.49
CLTCL1P53675 RPL23AP87-202ENST00000573039 466 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 AC091167.4-201ENST00000605079 184 ntBASIC5.76□□□□□ -1.49
CLTCL1P53675 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CLTCL1P53675 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLTCL1P53675 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CLTCL1P53675 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.75□□□□□ -1.49
CLTCL1P53675 AL627171.1-201ENST00000618845 1308 ntBASIC5.75□□□□□ -1.49
CLTCL1P53675 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLTCL1P53675 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLTCL1P53675 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLTCL1P53675 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.75□□□□□ -1.49
CLTCL1P53675 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.75□□□□□ -1.49
CLTCL1P53675 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CLTCL1P53675 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms