Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC135068.12-201ENST00000637370 931 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC074101.1-201ENST00000637861 241 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NKX2-1P43699 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 AL359922.3-201ENST00000624779 1670 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.12□□□□□ -1.75
NKX2-1P43699 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.12□□□□□ -1.75
NKX2-1P43699 AC114546.3-201ENST00000623582 1734 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 CYP1D1P-201ENST00000416662 1433 ntBASIC4.12□□□□□ -1.75
NKX2-1P43699 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NKX2-1P43699 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 ASNSP1-201ENST00000518311 1939 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX2-1P43699 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 RN7SKP113-201ENST00000363891 295 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NKX2-1P43699 MTND4P3-201ENST00000417829 541 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 SAGE2P-201ENST00000420011 2126 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-1P43699 IPPKP1-201ENST00000422501 768 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 XKRYP1-201ENST00000423438 492 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 NANOGP5-201ENST00000424456 877 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AL031736.2-201ENST00000426573 787 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 MTATP6P17-201ENST00000431030 672 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 XKRYP2-201ENST00000432915 492 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX2-1P43699 TXNP5-201ENST00000441043 315 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 VN1R25P-201ENST00000443385 738 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 ELOCP13-201ENST00000443934 329 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 Z73417.1-201ENST00000447373 778 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-1P43699 RHEBP2-201ENST00000450289 600 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AC011225.1-201ENST00000457751 369 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 RN7SL51P-201ENST00000468230 285 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 AC091860.1-201ENST00000505723 432 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 PRELID3BP5-201ENST00000508612 460 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-1P43699 TCP11X3P-202ENST00000514289 1254 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 SNORD46.2-201ENST00000516021 102 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 RNA5SP464-201ENST00000516251 108 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.11□□□□□ -1.75
NKX2-1P43699 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.11□□□□□ -1.75
NKX2-1P43699 LRRC6P1-201ENST00000532188 885 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-1P43699 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-1P43699 AL442163.2-201ENST00000553912 710 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX2-1P43699 AGGF1P5-201ENST00000567900 919 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-1P43699 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.11□□□□□ -1.75
NKX2-1P43699 AL035411.2-201ENST00000604022 421 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AC068313.1-201ENST00000604028 1008 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AC090948.2-201ENST00000607363 564 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 AC140725.3-201ENST00000616193 880 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 CIR1P2-201ENST00000514821 1342 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 DDX18P5-201ENST00000534547 1306 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NKX2-1P43699 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 CR788268.1-201ENST00000603931 1809 ntBASIC4.11□□□□□ -1.75
NKX2-1P43699 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
NKX2-1P43699 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.11□□□□□ -1.75
NKX2-1P43699 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-1P43699 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NKX2-1P43699 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-1P43699 AC022893.2-201ENST00000564832 3296 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.1□□□□□ -1.75
NKX2-1P43699 MAPK10-303ENST00000641324 3959 ntBASIC4.1□□□□□ -1.75
NKX2-1P43699 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms