Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL1P09341 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.25□□□□□ -1.89
CXCL1P09341 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL1P09341 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.25□□□□□ -1.89
CXCL1P09341 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL1P09341 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.25□□□□□ -1.89
CXCL1P09341 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.25□□□□□ -1.89
CXCL1P09341 AC007225.2-201ENST00000562529 256 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.25□□□□□ -1.89
CXCL1P09341 AL512782.1-201ENST00000603093 364 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 MRPS35P3-201ENST00000603189 709 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 AL133338.2-201ENST00000604292 736 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 AC017076.1-201ENST00000607613 578 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.25□□□□□ -1.89
CXCL1P09341 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.25□□□□□ -1.89
CXCL1P09341 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.25□□□□□ -1.89
CXCL1P09341 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL1P09341 INTS6P1-201ENST00000504674 2530 ntBASIC3.25□□□□□ -1.89
CXCL1P09341 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
CXCL1P09341 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CXCL1P09341 AL590763.1-201ENST00000398297 1545 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 CR381670.1-201ENST00000624291 1693 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.24□□□□□ -1.89
CXCL1P09341 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CXCL1P09341 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 AC021146.4-201ENST00000309229 279 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 RN7SKP44-201ENST00000363602 316 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 ATP5F1P4-201ENST00000397288 746 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 RN7SKP273-201ENST00000411392 314 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AC098592.2-201ENST00000413158 265 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AC093162.1-201ENST00000419682 124 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 AL159169.1-201ENST00000421119 127 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 NPM1P34-201ENST00000428821 893 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.24□□□□□ -1.89
CXCL1P09341 YWHAZP2-201ENST00000440317 728 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL1P09341 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.24□□□□□ -1.89
CXCL1P09341 RAD23BP3-201ENST00000454157 1152 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 RPL21P71-201ENST00000465598 459 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 RN7SL738P-201ENST00000470264 297 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.24□□□□□ -1.89
CXCL1P09341 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.24□□□□□ -1.89
CXCL1P09341 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CXCL1P09341 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL1P09341 SOX5P1-201ENST00000524155 1127 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 TOMM20P2-201ENST00000540082 421 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.24□□□□□ -1.89
CXCL1P09341 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.24□□□□□ -1.89
CXCL1P09341 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.24□□□□□ -1.89
CXCL1P09341 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 MTND2P13-201ENST00000577438 1039 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL1P09341 AC123786.2-201ENST00000603459 275 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AC015849.6-201ENST00000605454 474 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AP000864.1-201ENST00000609424 650 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AP000255.1-201ENST00000610276 676 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AC116447.1-201ENST00000613153 453 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 MIR6861-201ENST00000618657 64 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AC026124.2-201ENST00000621847 656 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 AC006065.6-201ENST00000625201 545 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 SDAD1P1-202ENST00000524156 2051 ntBASIC3.24□□□□□ -1.89
CXCL1P09341 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL1P09341 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CXCL1P09341 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL1P09341 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL1P09341 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CXCL1P09341 RN7SKP15-201ENST00000364742 309 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 AL391361.1-201ENST00000405580 489 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 AL136131.1-201ENST00000406079 803 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 SNORA81-201ENST00000408493 178 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.23□□□□□ -1.89
CXCL1P09341 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 RPL12P34-201ENST00000424532 479 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 AC017083.1-201ENST00000428093 483 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL1P09341 AC096638.2-201ENST00000434965 711 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 BTG3P1-201ENST00000435859 716 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.23□□□□□ -1.89
CXCL1P09341 ELOCP10-201ENST00000440624 327 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 VN1R25P-201ENST00000443385 738 ntBASIC3.23□□□□□ -1.89
CXCL1P09341 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL1P09341 RPL23AP43-201ENST00000446445 471 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms