Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 DDX6P1-205ENST00000441966 1436 ntBASIC3.35□□□□□ -1.87
HLA-DQA1P01909 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DQA1P01909 AC139769.1-204ENST00000472297 1931 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AL391684.1-202ENST00000641293 1636 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 FAM3C2-201ENST00000312214 681 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 HSPD1P16-201ENST00000402302 394 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 RNU4-34P-201ENST00000410431 124 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC093162.1-201ENST00000419682 124 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AF228730.2-201ENST00000438784 848 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 TPTE2P3-201ENST00000441562 1189 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 ABCF2P2-201ENST00000450549 296 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 ISCUP1-201ENST00000454451 448 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC097484.1-201ENST00000471148 389 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC006517.1-201ENST00000480485 328 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 RN7SL319P-201ENST00000480656 221 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC109462.1-201ENST00000491087 368 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC109458.1-201ENST00000508858 316 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 RN7SKP147-201ENST00000517154 244 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC013701.1-201ENST00000522657 465 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 OR4A46P-201ENST00000527255 933 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC023158.1-201ENST00000561632 1025 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC015911.5-201ENST00000587076 451 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC015802.5-201ENST00000607478 399 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AL391834.1-201ENST00000609609 560 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 AC119674.1-212ENST00000641155 993 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
HLA-DQA1P01909 CIR1P2-201ENST00000514821 1342 ntBASIC3.34□□□□□ -1.87
HLA-DQA1P01909 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-DQA1P01909 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
HLA-DQA1P01909 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC090971.4-201ENST00000560291 1800 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 RNU6-40P-201ENST00000384254 107 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 MIR320B1-201ENST00000390209 79 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 NPM1P10-201ENST00000398310 865 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 MTND3P20-201ENST00000407663 186 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC114755.2-201ENST00000413520 361 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 RBMY1KP-201ENST00000423480 476 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC099063.2-201ENST00000446360 662 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC239809.1-201ENST00000450470 217 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 MTND2P3-201ENST00000452458 470 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC079168.2-201ENST00000453977 416 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC005532.2-201ENST00000467154 373 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC090114.3-201ENST00000479267 829 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 RPS4XP14-201ENST00000493072 781 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC083829.1-201ENST00000503756 657 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC093770.1-201ENST00000511559 571 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 NPM1P47-201ENST00000560843 856 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC006116.3-201ENST00000592968 361 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC090181.2-201ENST00000602975 672 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC110741.2-201ENST00000605278 268 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC012557.1-201ENST00000607115 611 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 Z98200.1-201ENST00000607298 470 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DQA1P01909 AC093799.2-201ENST00000610062 578 ntBASIC3.33□□□□□ -1.88
HLA-DQA1P01909 MIR486-1-201ENST00000612171 68 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms