Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RPL7P9-201ENST00000468715 747 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 RPS23P1-201ENST00000491662 432 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 HNRNPKP5-201ENST00000515300 253 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 RAB9BP1-201ENST00000519581 626 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.71□□□□□ -1.66
CTDNEP1O95476 AC008126.1-201ENST00000549019 480 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 AC233280.2-201ENST00000603917 1070 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 MLECP1-201ENST00000615893 709 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 AC009237.17-201ENST00000618111 748 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.71□□□□□ -1.66
CTDNEP1O95476 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTDNEP1O95476 A2MP1-204ENST00000566278 4130 ntBASIC4.71□□□□□ -1.66
CTDNEP1O95476 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTDNEP1O95476 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTDNEP1O95476 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTDNEP1O95476 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTDNEP1O95476 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDNEP1O95476 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDNEP1O95476 OR11H4-201ENST00000315409 1082 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDNEP1O95476 RNA5SP104-201ENST00000410989 118 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 MTND6P5-201ENST00000448266 512 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 TPT1P13-201ENST00000449760 499 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 RPS11P1-201ENST00000451072 473 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC093890.1-201ENST00000502554 540 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC025445.1-201ENST00000502728 300 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC083829.1-201ENST00000503756 657 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC023575.1-201ENST00000580510 358 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 MIR3939-201ENST00000582614 106 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC110743.1-201ENST00000584870 478 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 IPO5P1-202ENST00000600039 287 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDNEP1O95476 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC233309.1-201ENST00000619522 751 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.7□□□□□ -1.66
CTDNEP1O95476 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTDNEP1O95476 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.7□□□□□ -1.66
CTDNEP1O95476 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTDNEP1O95476 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTDNEP1O95476 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTDNEP1O95476 RNU4-44P-201ENST00000363050 141 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 SNORD35B-201ENST00000363660 87 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC233289.1-201ENST00000403700 508 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC016397.1-201ENST00000412463 242 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 HSPE1P12-201ENST00000412576 301 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 RPL23AP38-201ENST00000423801 469 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 GSTA7P-201ENST00000438425 448 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 AL589765.3-201ENST00000446084 462 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 RPL7P24-201ENST00000493052 752 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 HPRT1P2-201ENST00000505250 544 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 SULT1C2P2-201ENST00000562517 294 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 MIR4284-201ENST00000578924 81 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC011477.5-201ENST00000586571 259 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTDNEP1O95476 MIR6868-201ENST00000611215 58 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC010608.2-201ENST00000624830 470 ntBASIC4.69□□□□□ -1.66
CTDNEP1O95476 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.69□□□□□ -1.66
CTDNEP1O95476 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTDNEP1O95476 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTDNEP1O95476 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms