Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.52□□□□□ -1.85
SDCBPO00560 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.52□□□□□ -1.85
SDCBPO00560 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.52□□□□□ -1.85
SDCBPO00560 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.52□□□□□ -1.85
SDCBPO00560 MIR4715-201ENST00000584117 79 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.52□□□□□ -1.85
SDCBPO00560 AC068020.1-201ENST00000594215 661 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.52□□□□□ -1.85
SDCBPO00560 AC068790.5-201ENST00000602741 355 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AC008536.1-201ENST00000602872 669 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.52□□□□□ -1.85
SDCBPO00560 AC116651.1-201ENST00000609724 556 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 MIR7703-201ENST00000620784 77 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AL023881.1-201ENST00000621088 301 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AC073342.3-201ENST00000624211 193 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.52□□□□□ -1.85
SDCBPO00560 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.52□□□□□ -1.85
SDCBPO00560 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
SDCBPO00560 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SDCBPO00560 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SDCBPO00560 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SDCBPO00560 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SDCBPO00560 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SDCBPO00560 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.52□□□□□ -1.85
SDCBPO00560 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.52□□□□□ -1.85
SDCBPO00560 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.51□□□□□ -1.85
SDCBPO00560 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.51□□□□□ -1.85
SDCBPO00560 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SDCBPO00560 MARK2P15-201ENST00000432204 2186 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDCBPO00560 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SDCBPO00560 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SDCBPO00560 ZNF603P-201ENST00000405613 487 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.51□□□□□ -1.85
SDCBPO00560 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.51□□□□□ -1.85
SDCBPO00560 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.51□□□□□ -1.85
SDCBPO00560 MTND2P25-201ENST00000449028 610 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDCBPO00560 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.51□□□□□ -1.85
SDCBPO00560 RPL23AP81-201ENST00000455252 467 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 AL133477.1-201ENST00000457472 514 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 RPL23AP71-201ENST00000470966 469 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 RPS27AP16-201ENST00000492222 470 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.51□□□□□ -1.85
SDCBPO00560 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.51□□□□□ -1.85
SDCBPO00560 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.51□□□□□ -1.85
SDCBPO00560 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.51□□□□□ -1.85
SDCBPO00560 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.51□□□□□ -1.85
SDCBPO00560 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.51□□□□□ -1.85
SDCBPO00560 AP003497.2-201ENST00000624220 967 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.51□□□□□ -1.85
SDCBPO00560 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SDCBPO00560 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SDCBPO00560 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SDCBPO00560 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.51□□□□□ -1.85
SDCBPO00560 EIF2AP4-201ENST00000424793 1781 ntBASIC3.51□□□□□ -1.85
SDCBPO00560 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
SDCBPO00560 LINC02471-203ENST00000641941 4752 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.5□□□□□ -1.85
SDCBPO00560 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDCBPO00560 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDCBPO00560 IGKV7-3-201ENST00000357453 298 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 RNA5SP502-201ENST00000362694 119 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 RNA5SP447-201ENST00000363749 119 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDCBPO00560 RPS4XP9-201ENST00000405151 780 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 RNA5SP36-201ENST00000410197 133 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.5□□□□□ -1.85
SDCBPO00560 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.5□□□□□ -1.85
SDCBPO00560 P2RY10P2-201ENST00000416730 913 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 MFSD13B-201ENST00000420133 1290 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 MTCO1P54-201ENST00000430139 712 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 RPL23AP46-201ENST00000438548 490 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.5□□□□□ -1.85
SDCBPO00560 RPL23AP24-201ENST00000458203 385 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 snoU13.1-201ENST00000459157 104 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 RPS20P4-201ENST00000461659 355 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SDCBPO00560 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.5□□□□□ -1.85
SDCBPO00560 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.5□□□□□ -1.85
SDCBPO00560 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.5□□□□□ -1.85
SDCBPO00560 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SDCBPO00560 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.5□□□□□ -1.85
SDCBPO00560 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.5□□□□□ -1.85
SDCBPO00560 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.5□□□□□ -1.85
SDCBPO00560 AC007599.1-201ENST00000568688 1174 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.5□□□□□ -1.85
SDCBPO00560 AC087468.1-201ENST00000604365 630 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 AL159169.2-201ENST00000610061 1269 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 AC026368.1-201ENST00000614934 690 ntBASIC3.5□□□□□ -1.85
SDCBPO00560 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.5□□□□□ -1.85
SDCBPO00560 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.5□□□□□ -1.85
SDCBPO00560 AL773545.4-201ENST00000637262 310 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms