Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 FGF7P3-201ENST00000454645 303 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 HAUS1P1-201ENST00000505275 832 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 RNA5SP446-201ENST00000515955 82 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 GSTP1P1-201ENST00000548078 319 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 EIF1AXP2-201ENST00000555940 413 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 MIR4277-201ENST00000578298 84 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC005229.3-201ENST00000603438 323 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AL356218.2-201ENST00000605264 187 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AL133370.2-201ENST00000619934 439 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 MTND4P26-201ENST00000415971 1359 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 AC074029.4-201ENST00000624796 1859 ntBASIC4.6□□□□□ -1.67
RPRD1AQ96P16 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RPRD1AQ96P16 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 RNU4-39P-201ENST00000362455 127 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 MIR141-201ENST00000384975 95 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 RPL23AP59-201ENST00000399415 461 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC009237.10-201ENST00000414112 510 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 RPL12P34-201ENST00000424532 479 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 RPL18P10-201ENST00000425606 538 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AL732292.1-201ENST00000426692 226 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AL354710.1-201ENST00000453641 246 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AL445433.1-201ENST00000457507 257 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 RPL23AP24-201ENST00000458203 385 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 NDUFB4P12-201ENST00000513465 390 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC034205.1-201ENST00000520621 638 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC068831.4-201ENST00000556118 109 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC018552.3-201ENST00000567416 561 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 MIR4284-201ENST00000578924 81 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 ELOCP28-201ENST00000590044 317 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC090181.2-201ENST00000602975 672 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC123786.2-201ENST00000603459 275 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AL023583.1-201ENST00000607518 1143 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 SNORD91B-202ENST00000608459 222 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AL391597.1-201ENST00000618707 694 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC012020.1-201ENST00000624541 1728 ntBASIC4.59□□□□□ -1.67
RPRD1AQ96P16 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.59□□□□□ -1.67
RPRD1AQ96P16 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
RPRD1AQ96P16 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 KPNA2P2-201ENST00000419546 1489 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 RNU6-984P-201ENST00000363236 109 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 RNU6-618P-201ENST00000363518 112 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 RNU1-130P-201ENST00000363930 160 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 RPS20P14-201ENST00000412545 360 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 HMGB1P32-201ENST00000425971 565 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 MTCO1P45-201ENST00000431457 267 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AL121877.1-201ENST00000453704 622 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC053481.1-201ENST00000467217 306 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 STRADBP1-201ENST00000478954 1281 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC093840.1-201ENST00000511599 336 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC117525.1-201ENST00000515228 503 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 IGHV3-63-201ENST00000518422 341 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC027455.1-201ENST00000574104 594 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC116447.1-201ENST00000613153 453 ntBASIC4.58□□□□□ -1.68
RPRD1AQ96P16 AC092159.4-201ENST00000624944 550 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms