Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AC067852.7-201ENST00000623270 535 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AL356121.2-201ENST00000624715 780 ntBASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.32□□□□□ -1.72
NUDCD3Q8IVD9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 GCNT6-201ENST00000379591 934 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 SNORD65-201ENST00000391079 73 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 RNU6-603P-201ENST00000411403 107 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AL161631.1-201ENST00000417933 486 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 CALM1P2-201ENST00000452941 448 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AL354710.1-201ENST00000453641 246 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 RN7SL177P-201ENST00000476596 299 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 PPM1AP1-201ENST00000502740 1135 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AC108145.1-201ENST00000503770 153 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AC139783.2-201ENST00000504847 1145 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 NPM1P35-201ENST00000533043 868 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AC016180.1-201ENST00000567945 403 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AL139286.1-201ENST00000604465 483 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 MIR6891-201ENST00000618788 93 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AC233309.1-201ENST00000619522 751 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AP006248.2-201ENST00000623309 592 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AC002044.3-201ENST00000623314 541 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AC138907.10-201ENST00000623708 983 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 ZNF962P-201ENST00000443465 3140 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 PHKBP1-201ENST00000450951 1951 ntBASIC4.31□□□□□ -1.72
NUDCD3Q8IVD9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 MIR659-201ENST00000384963 97 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 GLULP6-201ENST00000399502 913 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 DHFRP5-201ENST00000406944 564 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 BX510359.3-201ENST00000422168 306 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC006065.1-201ENST00000422539 802 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 XKRYP6-201ENST00000440468 1116 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 XKRYP3-201ENST00000442113 1116 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 TXNP2-201ENST00000443918 295 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AL451050.1-201ENST00000450126 415 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 IFNWP4-201ENST00000453148 294 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC026348.1-201ENST00000462549 1053 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 RN7SL727P-201ENST00000482164 296 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 OR5M14P-201ENST00000506803 618 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 ATP1B1P1-201ENST00000509767 915 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 RNU6-551P-201ENST00000516661 103 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC009268.1-201ENST00000561352 1203 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 BMS1P7-201ENST00000602440 1052 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 HMGB1P51-201ENST00000605166 638 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC034236.3-201ENST00000605999 461 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC074276.2-201ENST00000619891 348 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 AC092159.4-201ENST00000624944 550 ntBASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NUDCD3Q8IVD9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms