Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 RN7SKP81-201ENST00000365603 331 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 Y_RNA.431-201ENST00000384086 102 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 MT-TR-201ENST00000387439 65 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC004386.1-201ENST00000393214 761 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 RPL12P12-201ENST00000424633 501 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 RIMKLBP2-201ENST00000424737 654 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AL365400.1-201ENST00000431854 640 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 ACTR3P2-201ENST00000439585 1257 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 SNRPBP1-201ENST00000443634 282 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC073909.1-201ENST00000447112 999 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC090142.1-201ENST00000465776 462 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC083798.1-201ENST00000472671 131 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 RN7SL379P-201ENST00000479912 293 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC034159.1-201ENST00000513885 583 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC011352.2-201ENST00000514574 1016 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 PMS2P3-207ENST00000529061 717 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC011611.1-201ENST00000552179 197 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AL389895.1-201ENST00000554127 252 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC034105.3-201ENST00000565294 442 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC023827.2-201ENST00000566880 1061 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 ACTG1P15-201ENST00000570019 1063 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC008521.2-201ENST00000591021 259 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC010463.3-201ENST00000594077 500 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AC009027.1-201ENST00000604510 479 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 AL589743.6-201ENST00000611025 117 ntBASIC7.09□□□□□ -1.27
RNF135Q8IUD6 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
RNF135Q8IUD6 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
RNF135Q8IUD6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RNF135Q8IUD6 MAPK10-270ENST00000641102 3538 ntBASIC7.09□□□□□ -1.28
RNF135Q8IUD6 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.09□□□□□ -1.28
RNF135Q8IUD6 ZNF33BP1-201ENST00000452497 1834 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AL133243.4-201ENST00000623116 3109 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 CUBNP3-201ENST00000457461 1784 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC127391.1-201ENST00000411737 98 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 CHEK2P5-201ENST00000423877 246 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF135Q8IUD6 CBX1P4-201ENST00000439415 457 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 RPL5P7-201ENST00000444235 813 ntBASIC7.08□□□□□ -1.28
RNF135Q8IUD6 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms