Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL451074.3-201ENST00000437709 472 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 RPS12P17-201ENST00000438591 377 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 AL391987.1-201ENST00000441025 200 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.41□□□□□ -1.38
SOX4Q06945 AL606490.1-201ENST00000452266 765 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.41□□□□□ -1.38
SOX4Q06945 AC079080.1-201ENST00000479841 822 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 PPIAP19-201ENST00000486414 492 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 RPL7P38-201ENST00000488396 739 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX4Q06945 AC023818.1-201ENST00000498379 384 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.41□□□□□ -1.38
SOX4Q06945 OR5D2P-201ENST00000524390 911 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 AF235103.2-201ENST00000525753 346 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 AC239860.2-201ENST00000525886 270 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 MTND1P35-201ENST00000526739 508 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 AC022832.1-201ENST00000530718 645 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.41□□□□□ -1.38
SOX4Q06945 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX4Q06945 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.41□□□□□ -1.38
SOX4Q06945 ZNF322P1-201ENST00000568013 1209 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX4Q06945 KPNA2P3-201ENST00000584190 848 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX4Q06945 AC008250.2-201ENST00000615261 205 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 AL596275.2-208ENST00000641192 594 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SOX4Q06945 AP000866.6-201ENST00000638898 3579 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SOX4Q06945 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SOX4Q06945 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX4Q06945 AC006511.3-201ENST00000624929 1783 ntBASIC6.41□□□□□ -1.38
SOX4Q06945 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.41□□□□□ -1.38
SOX4Q06945 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SOX4Q06945 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX4Q06945 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SOX4Q06945 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX4Q06945 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SOX4Q06945 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
SOX4Q06945 RN7SKP69-201ENST00000365390 305 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SOX4Q06945 MIR217-201ENST00000384817 110 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 MIR323B-201ENST00000385269 82 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 RNU6-1300P-201ENST00000391046 108 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 EI24P3-201ENST00000399046 1062 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.4□□□□□ -1.38
SOX4Q06945 AC116036.1-201ENST00000412199 367 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AC109780.2-201ENST00000413467 845 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 C1DP2-201ENST00000418167 426 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 USP9YP27-201ENST00000418455 438 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SOX4Q06945 AL356583.2-201ENST00000426536 280 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.4□□□□□ -1.38
SOX4Q06945 Z93242.1-201ENST00000427102 353 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 VDAC1P6-201ENST00000430062 855 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AC093716.1-201ENST00000435923 377 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 SUMO2P3-201ENST00000438311 288 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AC079922.1-201ENST00000443291 359 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX4Q06945 AC093166.4-201ENST00000457867 318 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 RN7SL352P-201ENST00000466002 277 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX4Q06945 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX4Q06945 RN7SL101P-201ENST00000496350 279 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX4Q06945 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX4Q06945 AC027544.3-201ENST00000535082 757 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.4□□□□□ -1.38
SOX4Q06945 DPPA3P2-202ENST00000557188 1219 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX4Q06945 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX4Q06945 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX4Q06945 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX4Q06945 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX4Q06945 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.4□□□□□ -1.38
SOX4Q06945 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.4□□□□□ -1.38
SOX4Q06945 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.4□□□□□ -1.38
SOX4Q06945 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SOX4Q06945 AL139286.1-201ENST00000604465 483 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AL683813.2-201ENST00000605245 502 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AL121655.1-201ENST00000605811 308 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 Y_RNA.812-201ENST00000610788 101 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 Y_RNA.784-201ENST00000613803 101 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 Y_RNA.787-201ENST00000616522 101 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 Y_RNA.780-201ENST00000617336 101 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 Y_RNA.801-201ENST00000619005 101 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 AC090574.1-201ENST00000623186 233 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 PARP4P2-201ENST00000446672 3326 ntBASIC6.4□□□□□ -1.38
SOX4Q06945 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SOX4Q06945 DCAF13P1-201ENST00000495256 1330 ntBASIC6.4□□□□□ -1.39
SOX4Q06945 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SOX4Q06945 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.4□□□□□ -1.39
SOX4Q06945 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SOX4Q06945 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
SOX4Q06945 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.4□□□□□ -1.39
SOX4Q06945 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.4□□□□□ -1.39
SOX4Q06945 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SOX4Q06945 AC100871.1-201ENST00000507871 1456 ntBASIC6.4□□□□□ -1.39
SOX4Q06945 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms