Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH11P55287 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH11P55287 AC233280.2-201ENST00000603917 1070 ntBASIC4.45□□□□□ -1.7
CDH11P55287 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH11P55287 OR7A19P-201ENST00000608051 733 ntBASIC4.45□□□□□ -1.7
CDH11P55287 RNU6-1192P-201ENST00000612197 107 ntBASIC4.45□□□□□ -1.7
CDH11P55287 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH11P55287 RNU6-489P-201ENST00000618289 107 ntBASIC4.45□□□□□ -1.7
CDH11P55287 AC007342.8-201ENST00000623278 678 ntBASIC4.45□□□□□ -1.7
CDH11P55287 AC091905.4-201ENST00000623432 202 ntBASIC4.45□□□□□ -1.7
CDH11P55287 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CDH11P55287 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH11P55287 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH11P55287 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH11P55287 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH11P55287 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH11P55287 DHX9P1-201ENST00000436565 3076 ntBASIC4.44□□□□□ -1.7
CDH11P55287 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH11P55287 INTS6P1-201ENST00000504674 2530 ntBASIC4.44□□□□□ -1.7
CDH11P55287 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH11P55287 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 AC103591.2-201ENST00000265259 766 ntBASIC4.44□□□□□ -1.7
CDH11P55287 METTL21EP-201ENST00000298105 713 ntBASIC4.44□□□□□ -1.7
CDH11P55287 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDH11P55287 RNA5SP123-201ENST00000363244 119 ntBASIC4.44□□□□□ -1.7
CDH11P55287 RNU6-666P-201ENST00000363499 107 ntBASIC4.44□□□□□ -1.7
CDH11P55287 MIR320B1-201ENST00000390209 79 ntBASIC4.44□□□□□ -1.7
CDH11P55287 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 HMGB1P13-201ENST00000406019 642 ntBASIC4.44□□□□□ -1.7
CDH11P55287 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 RN7SKP114-201ENST00000410327 279 ntBASIC4.44□□□□□ -1.7
CDH11P55287 RN7SKP222-201ENST00000410651 315 ntBASIC4.44□□□□□ -1.7
CDH11P55287 RPL37P18-201ENST00000411602 243 ntBASIC4.44□□□□□ -1.7
CDH11P55287 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH11P55287 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH11P55287 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH11P55287 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.44□□□□□ -1.7
CDH11P55287 MTCO2P23-201ENST00000425216 680 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 FO393419.3-201ENST00000428741 282 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH11P55287 Z80107.1-201ENST00000436830 412 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC097499.1-201ENST00000444277 208 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.44□□□□□ -1.7
CDH11P55287 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH11P55287 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH11P55287 AC022795.1-201ENST00000473808 480 ntBASIC4.44□□□□□ -1.7
CDH11P55287 HPRT1P1-201ENST00000509498 657 ntBASIC4.44□□□□□ -1.7
CDH11P55287 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH11P55287 AP001207.2-201ENST00000519490 539 ntBASIC4.44□□□□□ -1.7
CDH11P55287 OR5AK3P-201ENST00000527486 1297 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC008083.2-201ENST00000546707 476 ntBASIC4.44□□□□□ -1.7
CDH11P55287 PCNPP1-201ENST00000552501 511 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 AL049838.1-201ENST00000563647 981 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC010735.1-201ENST00000567305 1026 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC006116.5-201ENST00000591936 559 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC011487.3-201ENST00000593607 453 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH11P55287 AC087783.2-201ENST00000605070 562 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AL049794.2-201ENST00000616301 365 ntBASIC4.44□□□□□ -1.7
CDH11P55287 CYCSP41-201ENST00000616920 296 ntBASIC4.44□□□□□ -1.7
CDH11P55287 FRG1HP-204ENST00000617940 757 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC012414.7-202ENST00000622705 1090 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC006840.1-201ENST00000623069 542 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH11P55287 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH11P55287 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDH11P55287 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 AC132825.7-201ENST00000638744 335 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AC106754.1-201ENST00000562632 1513 ntBASIC4.44□□□□□ -1.7
CDH11P55287 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.44□□□□□ -1.7
CDH11P55287 AC027228.2-201ENST00000567141 2154 ntBASIC4.44□□□□□ -1.7
CDH11P55287 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH11P55287 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH11P55287 MAPK10-263ENST00000641052 4307 ntBASIC4.43□□□□□ -1.7
CDH11P55287 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH11P55287 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDH11P55287 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH11P55287 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH11P55287 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms