Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.66□□□□□ -1.66
COL11A1P12107 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL11A1P12107 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL11A1P12107 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.66□□□□□ -1.66
COL11A1P12107 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
COL11A1P12107 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL11A1P12107 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL11A1P12107 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL11A1P12107 SNORA5A-201ENST00000384111 134 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 MIR670-201ENST00000390142 98 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL11A1P12107 AL031584.1-201ENST00000447169 754 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.65□□□□□ -1.66
COL11A1P12107 NANOGP10-201ENST00000453325 895 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 EIF2S2P5-201ENST00000457635 968 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.65□□□□□ -1.66
COL11A1P12107 AC010460.1-201ENST00000507087 466 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 RN7SKP46-201ENST00000515942 234 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 AC026403.1-201ENST00000518938 295 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.65□□□□□ -1.66
COL11A1P12107 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.65□□□□□ -1.66
COL11A1P12107 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.65□□□□□ -1.66
COL11A1P12107 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.65□□□□□ -1.66
COL11A1P12107 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.65□□□□□ -1.66
COL11A1P12107 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL11A1P12107 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL11A1P12107 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL11A1P12107 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL11A1P12107 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL11A1P12107 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL11A1P12107 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL11A1P12107 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL11A1P12107 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL11A1P12107 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.65□□□□□ -1.67
COL11A1P12107 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL11A1P12107 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL11A1P12107 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
COL11A1P12107 RNA5SP119-201ENST00000362715 117 ntBASIC4.65□□□□□ -1.67
COL11A1P12107 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.65□□□□□ -1.67
COL11A1P12107 AC233289.1-201ENST00000403700 508 ntBASIC4.65□□□□□ -1.67
COL11A1P12107 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.65□□□□□ -1.67
COL11A1P12107 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.65□□□□□ -1.67
COL11A1P12107 AL500522.2-201ENST00000448562 343 ntBASIC4.65□□□□□ -1.67
COL11A1P12107 RPL7L1P8-201ENST00000469911 741 ntBASIC4.65□□□□□ -1.67
COL11A1P12107 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.65□□□□□ -1.67
COL11A1P12107 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.65□□□□□ -1.67
COL11A1P12107 AC100770.1-201ENST00000532310 322 ntBASIC4.65□□□□□ -1.67
COL11A1P12107 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.65□□□□□ -1.67
COL11A1P12107 RN7SL371P-201ENST00000578099 267 ntBASIC4.65□□□□□ -1.67
COL11A1P12107 AL031666.3-201ENST00000609320 1006 ntBASIC4.65□□□□□ -1.67
COL11A1P12107 AC090246.1-201ENST00000616499 426 ntBASIC4.65□□□□□ -1.67
COL11A1P12107 AC067931.1-201ENST00000624190 671 ntBASIC4.65□□□□□ -1.67
COL11A1P12107 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.64□□□□□ -1.67
COL11A1P12107 RNA5SP372-201ENST00000390836 115 ntBASIC4.64□□□□□ -1.67
COL11A1P12107 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.64□□□□□ -1.67
COL11A1P12107 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.64□□□□□ -1.67
COL11A1P12107 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.64□□□□□ -1.67
COL11A1P12107 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.64□□□□□ -1.67
COL11A1P12107 AC023509.5-201ENST00000617434 807 ntBASIC4.64□□□□□ -1.67
COL11A1P12107 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL11A1P12107 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 SNORA71.3-201ENST00000362582 128 ntBASIC4.63□□□□□ -1.67
COL11A1P12107 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.63□□□□□ -1.67
COL11A1P12107 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.63□□□□□ -1.67
COL11A1P12107 AC083863.1-201ENST00000438811 231 ntBASIC4.63□□□□□ -1.67
COL11A1P12107 NOTCH2P1-201ENST00000443481 624 ntBASIC4.63□□□□□ -1.67
COL11A1P12107 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
COL11A1P12107 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL11A1P12107 RPS20P21-201ENST00000466859 343 ntBASIC4.63□□□□□ -1.67
COL11A1P12107 AC025554.1-201ENST00000505641 188 ntBASIC4.63□□□□□ -1.67
COL11A1P12107 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.63□□□□□ -1.67
COL11A1P12107 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.63□□□□□ -1.67
COL11A1P12107 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.63□□□□□ -1.67
COL11A1P12107 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.63□□□□□ -1.67
COL11A1P12107 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.63□□□□□ -1.67
COL11A1P12107 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.63□□□□□ -1.67
COL11A1P12107 AC015967.1-201ENST00000619893 476 ntBASIC4.63□□□□□ -1.67
COL11A1P12107 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms