Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXC6P09630 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXC6P09630 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 AL031119.1-201ENST00000404707 1879 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC6P09630 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 AC011933.1-201ENST00000413334 321 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 AL512661.1-201ENST00000434586 1253 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 MTND2P21-201ENST00000436242 1042 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 RRM2P4-201ENST00000441721 562 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC6P09630 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC6P09630 MTND1P31-201ENST00000449206 961 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 MTND2P6-201ENST00000455337 1030 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 AC116533.1-201ENST00000459748 321 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC6P09630 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC6P09630 MIR2116-201ENST00000517221 80 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC6P09630 SEC11B-201ENST00000518383 499 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 AP003355.1-201ENST00000518956 587 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXC6P09630 MRPL49P2-201ENST00000521066 465 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 MTND2P38-201ENST00000522536 667 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC6P09630 UBTFL9-201ENST00000534504 1148 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXC6P09630 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC6P09630 MIMT1-201ENST00000597105 1050 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 AC084824.4-201ENST00000620106 731 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 AC009039.2-201ENST00000624524 529 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 RNA5SP196-201ENST00000625967 102 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 Z95331.1-201ENST00000623075 23112 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXC6P09630 STX3-208ENST00000641815 3236 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXC6P09630 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.22□□□□□ -1.57
HOXC6P09630 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 AL929601.4-201ENST00000613011 1341 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.22□□□□□ -1.57
HOXC6P09630 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC6P09630 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.21□□□□□ -1.57
HOXC6P09630 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC6P09630 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
HOXC6P09630 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC6P09630 AC104118.1-201ENST00000607625 1589 ntBASIC5.21□□□□□ -1.57
HOXC6P09630 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HOXC6P09630 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
HOXC6P09630 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXC6P09630 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXC6P09630 AL121657.1-201ENST00000327215 531 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 RNA5SP366-201ENST00000365454 123 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC6P09630 SNORA48.7-201ENST00000391302 135 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 RPS26P8-201ENST00000393490 348 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC096644.3-201ENST00000416788 338 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 VPS26BP1-201ENST00000417155 755 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC6P09630 NPM1P26-201ENST00000426339 738 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC6P09630 ZNF965P-201ENST00000432501 817 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC6P09630 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC099063.2-201ENST00000446360 662 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 AC114755.5-201ENST00000447760 831 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC6P09630 DUXAP8-207ENST00000456786 622 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC090602.1-201ENST00000469695 252 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC093663.2-201ENST00000484625 313 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 RPS27AP16-201ENST00000492222 470 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXC6P09630 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC138832.1-201ENST00000522871 556 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC6P09630 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXC6P09630 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXC6P09630 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC090888.2-201ENST00000559765 1144 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXC6P09630 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC106785.1-201ENST00000565935 262 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 AC010547.7-201ENST00000570323 333 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXC6P09630 AC090666.1-201ENST00000578241 445 ntBASIC5.21□□□□□ -1.58
HOXC6P09630 AP001160.4-201ENST00000596971 382 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms