Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4BO75351 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.32□□□□□ -1.56
VPS4BO75351 RNA5SP319-201ENST00000362768 119 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 Y_RNA.192-201ENST00000363977 102 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VPS4BO75351 ATP5F1P3-201ENST00000397213 657 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 SETP15-201ENST00000412724 337 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AL139128.1-201ENST00000413921 941 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 LINC01881-201ENST00000416103 412 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS4BO75351 AL139148.1-201ENST00000427122 680 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4BO75351 RPL19P16-201ENST00000433839 588 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AC006335.2-201ENST00000437993 330 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 EEF1B2P5-201ENST00000444820 548 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 MTND2P4-201ENST00000445034 1004 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4BO75351 AC090804.1-201ENST00000448870 490 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 DNAJC19P8-201ENST00000452887 259 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS4BO75351 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS4BO75351 AC090114.3-201ENST00000479267 829 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 RN7SL727P-201ENST00000482164 296 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4BO75351 AC111193.1-201ENST00000504097 155 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4BO75351 AC093755.1-201ENST00000512950 1023 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 SCARNA20.4-201ENST00000516969 131 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS4BO75351 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4BO75351 AC092747.2-201ENST00000545069 983 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.32□□□□□ -1.56
VPS4BO75351 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS4BO75351 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS4BO75351 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS4BO75351 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VPS4BO75351 AC015720.2-201ENST00000567709 334 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 AC108738.1-201ENST00000603703 237 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 AC105227.2-201ENST00000615075 605 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 MIR8080-201ENST00000622224 89 ntBASIC5.32□□□□□ -1.56
VPS4BO75351 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VPS4BO75351 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VPS4BO75351 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VPS4BO75351 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
VPS4BO75351 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS4BO75351 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS4BO75351 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
VPS4BO75351 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 Z95331.1-201ENST00000623075 23112 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 RNU6-249P-201ENST00000363016 102 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 RNU6-77P-201ENST00000410554 91 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 RN7SKP213-201ENST00000410746 298 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS4BO75351 RPSAP35-201ENST00000413753 818 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.31□□□□□ -1.56
VPS4BO75351 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC011233.1-201ENST00000422812 283 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS4BO75351 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS4BO75351 CYCSP11-201ENST00000436426 315 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS4BO75351 AC073648.4-201ENST00000442655 781 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC118469.1-201ENST00000442943 488 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 CEACAMP7-201ENST00000444105 496 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS4BO75351 AL450996.1-201ENST00000445574 1202 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.31□□□□□ -1.56
VPS4BO75351 AC073850.1-201ENST00000449243 255 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VPS4BO75351 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS4BO75351 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.31□□□□□ -1.56
VPS4BO75351 AC005532.2-201ENST00000467154 373 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 RN7SL583P-201ENST00000475692 287 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.31□□□□□ -1.56
VPS4BO75351 AC108734.3-201ENST00000481241 1165 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 GAPDHP39-201ENST00000481866 979 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC073522.1-201ENST00000483312 377 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.31□□□□□ -1.56
VPS4BO75351 AC104971.1-201ENST00000495117 578 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 OR2A20P-203ENST00000498397 1268 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VPS4BO75351 IGBP1P4-201ENST00000503202 879 ntBASIC5.31□□□□□ -1.56
VPS4BO75351 AC104090.1-201ENST00000506341 1171 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms