Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC069240.1-201ENST00000548774 375 ntBASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL008729.2-201ENST00000606393 473 ntBASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 MIR492-201ENST00000638676 116 ntBASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 EIF2AP4-201ENST00000424793 1781 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 RNA5SP515-201ENST00000364570 118 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 RNA5SP151-201ENST00000365632 117 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 MIR3065-201ENST00000390137 79 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 TRAV35-201ENST00000390462 330 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 RCC2P2-201ENST00000422174 918 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 RPL23AP38-201ENST00000423801 469 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 HSFY6P-201ENST00000445573 403 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 VN1R96P-201ENST00000446052 858 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC012671.1-201ENST00000451912 203 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 RPS7P7-201ENST00000463499 571 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 RPS26P28-201ENST00000470806 348 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 RNA5SP446-201ENST00000515955 82 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 RNA5SP497-201ENST00000516081 97 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 DYNLL1P4-201ENST00000549314 266 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC090515.3-201ENST00000560431 315 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 MIR1254-2-201ENST00000579553 63 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC113403.1-201ENST00000604910 193 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 LINC00901.1-201ENST00000617252 152 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 CPHL1P-201ENST00000461341 3407 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 LINC00622-201ENST00000562811 1570 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC139713.2-215ENST00000641428 5037 ntBASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.3□□□□□ -1.72
TMX2-CTNND1H3BSU7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 MAPK10-303ENST00000641324 3959 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 RNA5SP513-201ENST00000364648 118 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 MIR659-201ENST00000384963 97 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 MIR921-201ENST00000401133 56 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC073136.2-201ENST00000417282 849 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC004552.1-201ENST00000419089 348 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 RPL23AP43-201ENST00000446445 471 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 RPS26P3-201ENST00000470205 348 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC090543.2-201ENST00000483963 348 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC004057.1-201ENST00000485827 348 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 RN7SL812P-201ENST00000493791 279 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 PPBPP1-201ENST00000510807 373 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 MYL12AP1-201ENST00000518490 515 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 CYCSP29-201ENST00000533731 318 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AP001804.2-201ENST00000533932 910 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC025884.1-201ENST00000556034 378 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC027455.1-201ENST00000574104 594 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 HMGB2P1-201ENST00000591146 634 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 BPIFA4P-203ENST00000603168 689 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC025175.1-201ENST00000606482 759 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AP005212.4-201ENST00000614206 710 ntBASIC4.29□□□□□ -1.72
TMX2-CTNND1H3BSU7 AC140479.6-201ENST00000633535 357 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms