Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC139426.3-201ENST00000605648 2059 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AC023245.2-201ENST00000530760 2978 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 RNU6-379P-201ENST00000363813 104 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 MIR548I2-201ENST00000408348 149 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 FCF1P2-201ENST00000415284 583 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AC094019.1-201ENST00000434678 472 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 RPL23AP19-201ENST00000436229 369 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 THAP12P8-201ENST00000447914 2115 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 SNORD19B-201ENST00000459623 84 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 RPL12P30-201ENST00000488389 499 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 RN7SL104P-201ENST00000498686 293 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AC025458.1-201ENST00000506046 166 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 OSBPL9P2-201ENST00000526582 1228 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AL359715.3-201ENST00000569267 2123 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 MIR6768-201ENST00000610734 72 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 AC040168.1-201ENST00000623594 991 ntBASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PDZRN3Q9UPQ7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 NEPNP-201ENST00000404786 1371 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AC138915.3-201ENST00000562908 1389 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AL021877.2-201ENST00000624442 10684 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 Y_RNA.257-201ENST00000364596 102 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 MIR548F4-201ENST00000408515 105 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 RN7SKP229-201ENST00000410465 302 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 RNU4-55P-201ENST00000410731 137 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 RNGTTP1-201ENST00000420965 728 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 RPS3P2-201ENST00000421346 701 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 GTF2IP13-201ENST00000438487 386 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 CXCR2P1-202ENST00000443392 1074 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 RPS27P5-201ENST00000444247 244 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 PDSS1P2-201ENST00000449397 678 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 MGAT2P1-201ENST00000449718 797 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AC023194.2-201ENST00000465398 406 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AL135752.1-201ENST00000479477 471 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 PPIAP19-201ENST00000486414 492 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AC021146.1-201ENST00000511202 716 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AC060775.1-201ENST00000518241 520 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 SEC11B-201ENST00000518383 499 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 BNIP3P26-201ENST00000600827 554 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 AC006600.2-201ENST00000624834 2506 ntBASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
PDZRN3Q9UPQ7 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms