Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 AL606834.2-201ENST00000602954 668 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 AC126118.1-201ENST00000607744 628 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 AC012409.3-201ENST00000611343 981 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 AC090607.5-201ENST00000615692 224 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 AC139769.3-201ENST00000618383 175 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 AP005431.1-201ENST00000618479 319 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 AC015660.5-201ENST00000623238 564 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 AL356596.1-201ENST00000624230 379 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 OR1S1-201ENST00000624470 978 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 AP000550.3-201ENST00000637734 379 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 MTND4P29-201ENST00000503122 1372 ntBASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.25□□□□□ -1.57
PACSIN3Q9UKS6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 NACA3P-201ENST00000359690 648 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 Y_RNA.88-201ENST00000363029 99 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 Y_RNA.248-201ENST00000364501 109 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 SNORA40.2-201ENST00000390847 128 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 VDAC2P1-201ENST00000399358 958 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 GSTA12P-201ENST00000402398 508 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AL009179.1-201ENST00000406085 265 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 RNU6-757P-201ENST00000410334 100 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC098592.2-201ENST00000413158 265 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 MTND4P28-201ENST00000426217 387 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC005189.1-201ENST00000431286 310 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AL121601.2-201ENST00000438019 707 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC009263.1-201ENST00000441193 1239 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC064862.4-201ENST00000442180 334 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 RPL30P6-201ENST00000475925 342 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC069528.1-202ENST00000482888 637 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 CBX3P3-201ENST00000508108 532 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC005178.1-201ENST00000508392 440 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC109458.1-201ENST00000508858 316 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 IMPA1P1-201ENST00000510718 842 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC026782.2-201ENST00000510845 636 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC098976.1-201ENST00000513014 541 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 CYCSP22-201ENST00000517555 339 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 CDC42P3-201ENST00000518493 633 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC109635.3-201ENST00000529536 185 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 HMGN2P36-201ENST00000529541 409 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AP004247.1-201ENST00000531556 1289 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 MTND1P15-201ENST00000579262 949 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AP005403.1-201ENST00000579720 229 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC127024.5-201ENST00000580085 462 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 MIR4999-201ENST00000585029 91 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC087683.1-201ENST00000591187 441 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 MTCYBP22-201ENST00000603788 447 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 TUG1_1.1-201ENST00000610654 145 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 MIR6768-201ENST00000610734 72 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 AC135068.5-201ENST00000624197 983 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 OR13C1P-202ENST00000641378 2919 ntBASIC5.24□□□□□ -1.57
PACSIN3Q9UKS6 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PACSIN3Q9UKS6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms