Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC027176.2-201ENST00000559166 746 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 RN7SL690P-201ENST00000582087 240 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC064801.1-201ENST00000612025 407 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC090510.2-201ENST00000617465 629 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 SNORA11.6-201ENST00000619030 128 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC008785.1-201ENST00000624475 456 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC110792.3-201ENST00000595906 1614 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC008033.1-201ENST00000216407 1162 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 SNORD113.2-201ENST00000364166 89 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 SNORA70F-201ENST00000384142 135 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 OR6C71P-201ENST00000432580 913 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AL627308.1-201ENST00000435693 821 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 MTCO3P17-201ENST00000443775 513 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 EIF4A1P11-201ENST00000451239 222 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC026348.1-201ENST00000462549 1053 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 LARP7P4-201ENST00000481075 878 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 OR5M14P-201ENST00000506803 618 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC017037.1-201ENST00000508460 471 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 IGHV3-63-201ENST00000518422 341 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 BRD9P1-201ENST00000529855 560 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 PCNPP1-201ENST00000552501 511 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AL109766.1-201ENST00000555080 552 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC021483.2-201ENST00000567415 758 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AL139286.1-201ENST00000604465 483 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AL354984.3-201ENST00000604803 325 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC012603.1-201ENST00000606424 528 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC012213.4-201ENST00000606457 354 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC090948.2-201ENST00000607363 564 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AC019131.2-201ENST00000609071 870 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 AL021997.2-201ENST00000615674 271 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 RMST_9.1-201ENST00000619945 193 ntBASIC4.07□□□□□ -1.76
VAPAQ9P0L0 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VAPAQ9P0L0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 OR11H5P-202ENST00000641612 1325 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 MIR365B-201ENST00000362317 111 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 RNA5SP87-201ENST00000384155 118 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 MT-TP-201ENST00000387461 68 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AL603766.1-201ENST00000407763 664 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 RPL6P29-201ENST00000414863 865 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 RPS20P1-201ENST00000434853 354 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AL353597.2-202ENST00000434901 373 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC010326.1-201ENST00000462726 602 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 NDUFB5P1-201ENST00000508134 564 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 IGKV1-32-201ENST00000519290 311 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AP001922.4-201ENST00000526967 290 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC006064.5-201ENST00000541782 248 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC018552.3-201ENST00000567416 561 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 OR1AB1P-201ENST00000585564 761 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC010615.3-201ENST00000597319 394 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC007620.3-201ENST00000608131 497 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC100847.1-201ENST00000611316 481 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AL445528.2-201ENST00000620582 470 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC018445.2-201ENST00000622987 260 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AC067852.7-201ENST00000623270 535 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 AL049536.1-201ENST00000625043 744 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.06□□□□□ -1.76
VAPAQ9P0L0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.06□□□□□ -1.76
VAPAQ9P0L0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms