Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HDHD3Q9BSH5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HDHD3Q9BSH5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 RHOT1P2-201ENST00000366423 333 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AL160275.2-201ENST00000412010 394 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC006065.1-201ENST00000422539 802 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 RPL23AP4-201ENST00000427757 463 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 ARL4AP4-201ENST00000434170 518 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 MTCYBP29-201ENST00000436327 1006 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 HIGD1AP8-201ENST00000453927 274 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC110749.1-201ENST00000462007 357 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 RPL5P30-201ENST00000465511 891 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC108145.1-201ENST00000503770 153 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 ATP1B1P1-201ENST00000509767 915 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC016550.3-201ENST00000515706 767 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 RNU6-889P-201ENST00000517189 103 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC069240.1-201ENST00000548774 375 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AL352979.3-201ENST00000553515 247 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 CD24P2-201ENST00000565486 219 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 MIR4646-201ENST00000580775 63 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AL355802.4-201ENST00000607635 548 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 SDR42E1P1-201ENST00000611327 477 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC007546.1-201ENST00000619452 559 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 AC073592.7-201ENST00000623659 507 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 CIR1P2-201ENST00000514821 1342 ntBASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.66□□□□□ -1.82
HDHD3Q9BSH5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
HDHD3Q9BSH5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
HDHD3Q9BSH5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
HDHD3Q9BSH5 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
HDHD3Q9BSH5 AC068254.2-201ENST00000623938 3577 ntBASIC3.65□□□□□ -1.82
HDHD3Q9BSH5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 MIR448-201ENST00000362131 111 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 RNU1-130P-201ENST00000363930 160 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 MIR93-201ENST00000385024 80 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AL645927.1-201ENST00000396783 406 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 GLULP6-201ENST00000399502 913 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 RPS24P12-201ENST00000402084 394 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AL645733.1-201ENST00000402250 217 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AL049697.2-201ENST00000403708 294 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 USP9YP19-201ENST00000412165 485 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 RPS26P13-201ENST00000419030 330 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AL139095.3-201ENST00000419672 1203 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 RPL7AP25-201ENST00000423357 805 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 PTMAP6-201ENST00000439110 327 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC245517.2-201ENST00000442890 346 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 RPL7L1P1-201ENST00000448259 785 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC010469.1-201ENST00000463864 576 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC008410.1-201ENST00000483777 339 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC021146.7-201ENST00000509604 775 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC108157.1-201ENST00000510511 539 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC093770.1-201ENST00000511559 571 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 ACTR6P1-201ENST00000514311 1104 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 IGHV3-63-201ENST00000518422 341 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 OR5BC1P-201ENST00000529327 739 ntBASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.65□□□□□ -1.83
HDHD3Q9BSH5 AL133247.2-201ENST00000603236 482 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms