Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC108145.1-201ENST00000503770 153 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AC011270.1-201ENST00000558606 583 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AC021483.2-201ENST00000567415 758 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AC018552.3-201ENST00000567416 561 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AC025175.1-201ENST00000606482 759 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AC017076.1-201ENST00000607613 578 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AC067852.7-201ENST00000623270 535 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AP006248.2-201ENST00000623309 592 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 AL049555.1-201ENST00000562834 1933 ntBASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDKL3Q8IVW4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC103591.2-201ENST00000265259 766 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 RNA5SP443-201ENST00000363083 132 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 MIR129-1-201ENST00000384972 72 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 RPS3AP23-201ENST00000401762 784 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 RBMY2KP-201ENST00000418221 992 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AL356387.2-201ENST00000422272 243 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 GTF2IP2-201ENST00000424290 697 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 MTND4LP13-201ENST00000425022 298 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 SEC63P1-201ENST00000425785 1258 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 RPL7P33-201ENST00000444159 742 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 FGF7P3-201ENST00000454645 303 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC133473.1-201ENST00000455173 299 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC010374.1-201ENST00000503762 1237 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 CDH12P4-201ENST00000517835 295 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 CDH12P3-201ENST00000517935 295 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 CDH12P1-201ENST00000518435 295 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 EIF4EP5-201ENST00000528228 640 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC006064.5-201ENST00000541782 248 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AL109766.1-201ENST00000555080 552 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 ELOCP28-201ENST00000590044 317 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 RPL12P25-202ENST00000598100 674 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 uc_338.13-201ENST00000618243 179 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC002044.3-201ENST00000623314 541 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC079298.2-201ENST00000623885 459 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDKL3Q8IVW4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC011266.1-201ENST00000624119 3569 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AL590139.1-201ENST00000416267 400 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 AC069213.2-201ENST00000420238 366 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 RWDD4P2-201ENST00000426392 563 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 FTH1P16-201ENST00000435241 552 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.42□□□□□ -1.7
CDKL3Q8IVW4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms